RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 EML4Q9HC35 981 aaKnown RBP13.96□□□□□ -0.17
PTPN7-216ENST00000492977 NPDC1Q9NQX5 325 aaPredicted RBP13.96□□□□□ -0.17
PTPN7-216ENST00000492977 SLC8A2Q9UPR5 921 aa13.96□□□□□ -0.17
PTPN7-216ENST00000492977 PCDHB1Q9Y5F3 818 aa13.96□□□□□ -0.17
PTPN7-216ENST00000492977 NEMP2A6NFY4 417 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 GAPDHSO14556 408 aaPredicted RBP13.96□□□□□ -0.18
PTPN7-216ENST00000492977 PRMT5O14744 637 aaPredicted RBP13.96□□□□□ -0.18
PTPN7-216ENST00000492977 HOXC11O43248 304 aaPredicted RBP13.96□□□□□ -0.18
PTPN7-216ENST00000492977 OR1I1O60431 355 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 DIAPH2O60879 1101 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 PRAMEF1O95521 474 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 ADH1CP00326 375 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 ESRRAP11474 423 aaPredicted RBP13.96□□□□□ -0.18
PTPN7-216ENST00000492977 ADH5P11766 374 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 ZNF7P17097 686 aaPredicted RBP13.96□□□□□ -0.18
PTPN7-216ENST00000492977 ITGALP20701 1170 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 KCNA5P22460 613 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 RPS3P23396 243 aaKnown RBP eCLIP13.96□□□□□ -0.18
PTPN7-216ENST00000492977 KCNC1P48547 511 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 ALDH18A1P54886 795 aaKnown RBP13.96□□□□□ -0.18
PTPN7-216ENST00000492977 POLR2LP62875 67 aaKnown RBP13.96□□□□□ -0.18
PTPN7-216ENST00000492977 NFATC2Q13469 925 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 KCNC3Q14003 757 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 GPR33Q49SQ1 333 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 CTSL3PQ5NE16 218 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 TMEM215Q68D42 235 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 CYB5D1Q6P9G0 228 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 CRTC1Q6UUV9 634 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 TMC5Q6UXY8 1006 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 NAT16Q8N8M0 369 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 STAG3L4Q8TBR4 150 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 WFIKKN2Q8TEU8 576 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 PTERQ96BW5 349 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 L3HYPDHQ96EM0 354 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 LRRC3BQ96PB8 259 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 CDCA3Q99618 268 aaPredicted RBP13.96□□□□□ -0.18
PTPN7-216ENST00000492977 GPR21Q99679 349 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 P2RY12Q9H244 342 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 ZDHHC6Q9H6R6 413 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 IL26Q9NPH9 171 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 KLC4Q9NSK0 619 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 ARMCX1Q9P291 453 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 ZDHHC2Q9UIJ5 367 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 TRMT6Q9UJA5 497 aaKnown RBP13.96□□□□□ -0.18
PTPN7-216ENST00000492977 FAM50BQ9Y247 325 aa13.96□□□□□ -0.18
PTPN7-216ENST00000492977 FNDC3AQ9Y2H6 1198 aaKnown RBP13.96□□□□□ -0.18
PTPN7-216ENST00000492977 ZNF106Q9H2Y7 1883 aaKnown RBP13.95□□□□□ -0.18
PTPN7-216ENST00000492977 SCN8AQ9UQD0 1980 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 TRBV5-4A0A0C4DH59 114 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 NPIPB15A6NHN6 443 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-216ENST00000492977 BNIP3LO60238 219 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 MGRN1O60291 552 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 ASLP04424 464 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 CYP17A1P05093 508 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 SRPRAP08240 638 aaKnown RBP13.95□□□□□ -0.18
PTPN7-216ENST00000492977 CISD3P0C7P0 127 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 C7P10643 843 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 BPIP17213 487 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 AOC1P19801 751 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 SPAM1P38567 509 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 MAGEA10P43363 369 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-216ENST00000492977 DGKGP49619 791 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 EML3Q32P44 896 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 TTC31Q49AM3 519 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-216ENST00000492977 ZDHHC20Q5W0Z9 365 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 BRAT1Q6PJG6 821 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 FAM151BQ6UXP7 276 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 GDPD4Q6W3E5 623 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 Q6ZVU0 165 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 OR2A12Q8NGT7 310 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 FRS2Q8WU20 508 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 PHF21BQ96EK2 531 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 MOCOSQ96EN8 888 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 FAR2Q96K12 515 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 ATOH8Q96SQ7 321 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 HEPHQ9BQS7 1158 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 ASB8Q9H765 288 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 CERS4Q9HA82 394 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 CYP4F12Q9HCS2 524 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 DZANK1Q9NVP4 752 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 TAGLN3Q9UI15 199 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 METRNQ9UJH8 293 aa13.95□□□□□ -0.18
PTPN7-216ENST00000492977 MTF2Q9Y483 593 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-216ENST00000492977 GLYATL1P3A0A0U1RQE8 302 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 E5RI56 91 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 H3BMM5 538 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 GRID2O43424 1007 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 KERAO60938 352 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 UGT2B4P06133 528 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 KRT16P08779 473 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 CHRM3P20309 590 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 SP100P23497 879 aaPredicted RBP13.94□□□□□ -0.18
PTPN7-216ENST00000492977 PBX2P40425 430 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 CCR10P46092 362 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 IL2P60568 153 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 HERVK_113P63132 956 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 OR4D1Q15615 310 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 GEN1Q17RS7 908 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 ZNF678Q5SXM1 525 aa13.94□□□□□ -0.18
PTPN7-216ENST00000492977 VWA5B1Q5TIE3 1220 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms