RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 HDAC4P56524 1084 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 EVCP57679 992 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 RPP30P78346 268 aaKnown RBP3.34□□□□□ -1.87
VPS36-205ENST00000492650 AIMP1Q12904 312 aaKnown RBP3.34□□□□□ -1.87
VPS36-205ENST00000492650 RBM39Q14498 530 aaKnown RBP3.34□□□□□ -1.87
VPS36-205ENST00000492650 ADIPOQQ15848 244 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 RPE65Q16518 533 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 PRICKLE4Q2TBC4 344 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 ZNF484Q5JVG2 852 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 SH2D4BQ5SQS7 431 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 FAM69AQ5T7M9 428 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 PMS2CLQ68D20 193 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 GALNT17Q6IS24 598 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 DCLRE1AQ6PJP8 1040 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 SLC9B2Q86UD5 537 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 DENND6AQ8IWF6 608 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 THNSL1Q8IYQ7 743 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 OTUD6BQ8N6M0 293 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 TMCO5AQ8N6Q1 288 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.34□□□□□ -1.87
VPS36-205ENST00000492650 DNAAF1Q8NEP3 725 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 LINS1Q8NG48 757 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 MOSPD2Q8NHP6 518 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 NFKBIDQ8NI38 313 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 RBM17Q96I25 401 aaKnown RBP3.34□□□□□ -1.87
VPS36-205ENST00000492650 MMTAG2Q9BU76 263 aaKnown RBP3.34□□□□□ -1.87
VPS36-205ENST00000492650 HCFC1R1Q9NWW0 138 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 CAMK2AQ9UQM7 478 aa3.34□□□□□ -1.87
VPS36-205ENST00000492650 RUSC2Q8N2Y8 1516 aa3.34□□□□□ -1.88
VPS36-205ENST00000492650 IGHV4OR15-8A0A075B7B6 117 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 A8MXE2 369 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 PLOD2O00469 737 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 IPO8O15397 1037 aaKnown RBP3.33□□□□□ -1.88
VPS36-205ENST00000492650 FMO6PO60774 539 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 KDM4BO94953 1096 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 CCNDBP1O95273 360 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 CLDN14O95500 239 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 CRYAAP02489 173 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 TNNT1P13805 278 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 KCNA5P22460 613 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 EPHA8P29322 1005 aaPredicted RBP3.33□□□□□ -1.88
VPS36-205ENST00000492650 KRT2P35908 639 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 CXCR3P49682 368 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 ZNF41P51814 821 aaPredicted RBP3.33□□□□□ -1.88
VPS36-205ENST00000492650 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 RPS3AP61247 264 aaKnown RBP3.33□□□□□ -1.88
VPS36-205ENST00000492650 UBXN2AP68543 259 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 SLC18A2Q05940 514 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 TROAPQ12815 778 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 RBBP5Q15291 538 aaKnown RBP3.33□□□□□ -1.88
VPS36-205ENST00000492650 E2F5Q15329 346 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 FBXO43Q4G163 708 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 BMP2KLQ5H9B9 411 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 TCP11X2Q5H9J9 407 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 PLEKHS1Q5SXH7 462 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 GARNL3Q5VVW2 1013 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 GJB7Q6PEY0 223 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 IYDQ6PHW0 289 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 CYP20A1Q6UW02 462 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 IKBIPQ70UQ0 350 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 TRMT1LQ7Z2T5 733 aaKnown RBP3.33□□□□□ -1.88
VPS36-205ENST00000492650 NUP54Q7Z3B4 507 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 SMIM29Q86T20 159 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 LURAP1LQ8IV03 231 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 CCAR2Q8N163 923 aaKnown RBP3.33□□□□□ -1.88
VPS36-205ENST00000492650 C17orf53Q8N3J3 647 aaPredicted RBP3.33□□□□□ -1.88
VPS36-205ENST00000492650 IL17RCQ8NAC3 791 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 SPC24Q8NBT2 197 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 Q8NFD4 153 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 ETNPPLQ8TBG4 499 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 METTL6Q8TCB7 284 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 TAF4BQ92750 862 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 ZNF653Q96CK0 615 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 NPLQ9BXD5 320 aaPredicted RBP3.33□□□□□ -1.88
VPS36-205ENST00000492650 DNAI2Q9GZS0 605 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 NDST4Q9H3R1 872 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 UBTD1Q9HAC8 227 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 PDE7BQ9NP56 450 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 ENTPD7Q9NQZ7 604 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 HPF1Q9NWY4 346 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 SMARCAL1Q9NZC9 954 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 HDAC6Q9UBN7 1215 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 RRP15Q9Y3B9 282 aaKnown RBP3.33□□□□□ -1.88
VPS36-205ENST00000492650 CCL27Q9Y4X3 112 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 CLDN16Q9Y5I7 305 aa3.33□□□□□ -1.88
VPS36-205ENST00000492650 GREB1LQ9C091 1923 aaPredicted RBP3.32□□□□□ -1.88
VPS36-205ENST00000492650 TYW5A2RUC4 315 aaKnown RBP3.32□□□□□ -1.88
VPS36-205ENST00000492650 CCDC69A6NI79 296 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 STX16-NPEPL1H3BU86 382 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 DDX39AO00148 427 aaKnown RBP3.32□□□□□ -1.88
VPS36-205ENST00000492650 STX16O14662 325 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 PSMA7O14818 248 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 KLK10O43240 276 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 ADAM20O43506 726 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 ATP2C2O75185 946 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 GAGE7O76087 117 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 ADAP00813 363 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 GAGE12FP0CL80 117 aa3.32□□□□□ -1.88
VPS36-205ENST00000492650 GAGE12GP0CL81 117 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms