RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 HS3ST1O14792 307 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 SMAD6O43541 496 aaKnown RBP3.89□□□□□ -1.79
VTA1-204ENST00000491881 HIST1H2ABP04908 130 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 LDHCP07864 332 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 CSH1P0DML2 217 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 CSH2P0DML3 217 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 SRCP12931 536 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 HIST1H2ADP20671 130 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 BDNFP23560 247 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 GCH1P30793 250 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 MRPL12P52815 198 aaKnown RBP3.89□□□□□ -1.79
VTA1-204ENST00000491881 SEC61A1P61619 476 aaKnown RBP3.89□□□□□ -1.79
VTA1-204ENST00000491881 CDC16Q13042 620 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 ACVR2BQ13705 512 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 OASLQ15646 514 aaKnown RBP3.89□□□□□ -1.79
VTA1-204ENST00000491881 ZNF805Q5CZA5 627 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 KCNT1Q5JUK3 1230 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 PLEKHS1Q5SXH7 462 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 USP43Q70EL4 1123 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 HIST3H2AQ7L7L0 130 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 SDCCAG8Q86SQ7 713 aaPredicted RBP3.89□□□□□ -1.79
VTA1-204ENST00000491881 PCDH20Q8N6Y1 951 aaKnown RBP3.89□□□□□ -1.79
VTA1-204ENST00000491881 OR1J2Q8NGS2 313 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 MAGEC3Q8TD91 643 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 APBB2Q92870 758 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 OR2A14Q96R47 310 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 CTAGE1Q96RT6 745 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 CMKLR1Q99788 373 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 C1QTNF1Q9BXJ1 281 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 SIL1Q9H173 461 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 SEBOXQ9HB31 216 aaPredicted RBP3.89□□□□□ -1.79
VTA1-204ENST00000491881 LTB4R2Q9NPC1 389 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 COPG2Q9UBF2 871 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 UBA2Q9UBT2 640 aaPredicted RBP3.89□□□□□ -1.79
VTA1-204ENST00000491881 NENFQ9UMX5 172 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 RUSC2Q8N2Y8 1516 aa3.89□□□□□ -1.79
VTA1-204ENST00000491881 A0A1W2PQ09 198 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 CDRT15L2A8MXV6 281 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 ERVV-2B6SEH9 535 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 MAP2K7O14733 419 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 OGG1O15527 345 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 RFPL2O75678 378 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 KDM4BO94953 1096 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 PORP16435 677 aaPredicted RBP3.88□□□□□ -1.79
VTA1-204ENST00000491881 PON1P27169 355 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 HOXA13P31271 388 aaPredicted RBP3.88□□□□□ -1.79
VTA1-204ENST00000491881 ACTN2P35609 894 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 MFAP4P55083 255 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 TAS2R38P59533 333 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 TUBA1BP68363 451 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 EPS8Q12929 822 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 TNFAIP1Q13829 316 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 IRF3Q14653 427 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 SLC39A14Q15043 492 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 BRINP3Q76B58 766 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 CCDC190Q86UF4 302 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 GPR180Q86V85 440 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 HJURPQ8NCD3 748 aaPredicted RBP3.88□□□□□ -1.79
VTA1-204ENST00000491881 OR2AK2Q8NG84 335 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 DNAAF4Q8WXU2 420 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 JAKMIP2Q96AA8 810 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 RTP4Q96DX8 246 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 SCMH1Q96GD3 660 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 ADGRG7Q96K78 797 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 GAD1Q99259 594 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 EPB41L5Q9HCM4 733 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 MCM9Q9NXL9 1143 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 SELENONQ9NZV5 590 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 MALT1Q9UDY8 824 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 SIX4Q9UIU6 781 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 ACSL5Q9ULC5 683 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 AMDHD2Q9Y303 409 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 CMAHPQ9Y471 501 aa3.88□□□□□ -1.79
VTA1-204ENST00000491881 CTDSP2O14595 271 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 AHCYL1O43865 530 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 PAPSS2O95340 614 aaPredicted RBP3.87□□□□□ -1.79
VTA1-204ENST00000491881 CLDN14O95500 239 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 ICAM1P05362 532 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 ZNF12P17014 697 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 SAT1P21673 171 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 MT3P25713 68 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 TMPOP42166 694 aaKnown RBP3.87□□□□□ -1.79
VTA1-204ENST00000491881 MSH2P43246 934 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 SLC15A1P46059 708 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 FASLGP48023 281 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 GPR143P51810 404 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 DSCR9P59020 149 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 ZXDBP98169 803 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 PDE1BQ01064 536 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 SREBF2Q12772 1141 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 GRSF1Q12849 480 aaKnown RBP eCLIP3.87□□□□□ -1.79
VTA1-204ENST00000491881 NFATC4Q14934 902 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 DECR1Q16698 335 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 MYLK3Q32MK0 819 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 RAB41Q5JT25 222 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 PMS2CLQ68D20 193 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 ZNF280DQ6N043 979 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 CFAP77Q6ZQR2 320 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 CLEC17AQ6ZS10 378 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 EPHX4Q8IUS5 362 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms