RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 ZFP42Q96MM3 310 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 ALPK1Q96QP1 1244 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 ADI1Q9BV57 179 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 ZNF717Q9BY31 904 aaPredicted RBP10.14□□□□□ -0.79
BRD9-209ENST00000490814 RHOBTB2Q9BYZ6 727 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 SEPT3Q9UH03 358 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 PRORSD1PA6NEY8 169 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 ZNF701M0R085 212 aaPredicted RBP10.14□□□□□ -0.79
BRD9-209ENST00000490814 MRASO14807 208 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 SLC35E2BP0CK96 405 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 CHRNA4P43681 627 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 CDH13P55290 713 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 RAB10P61026 200 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 COX10Q12887 443 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 FAM187BQ17R55 369 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 PGS1Q32NB8 556 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 ATAD3BQ5T9A4 648 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 ARHGAP36Q6ZRI8 547 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 DNAJC5GQ8N7S2 189 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 CNTD1Q8N815 330 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 HDAC11Q96DB2 347 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 TDRD1Q9BXT4 1180 aaKnown RBP10.14□□□□□ -0.79
BRD9-209ENST00000490814 MROH8Q9H579 483 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 MRPL40Q9NQ50 206 aaKnown RBP10.14□□□□□ -0.79
BRD9-209ENST00000490814 WBP1LQ9NX94 342 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 CNOT11Q9UKZ1 510 aaKnown RBP10.14□□□□□ -0.79
BRD9-209ENST00000490814 POLHQ9Y253 713 aa10.14□□□□□ -0.79
BRD9-209ENST00000490814 TRPC5OSA6NMA1 111 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 SNPHO15079 494 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 DAB1O75553 588 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 SRP72O76094 671 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 PRKAR2AP13861 404 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 SLC7A1P30825 629 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 CREB5Q02930 508 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 SOX4Q06945 474 aaPredicted RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 CACNB2Q08289 660 aaPredicted RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 FAM122CQ6P4D5 195 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 LRRC52Q8N7C0 313 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 NAT16Q8N8M0 369 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 PPHLN1Q8NEY8 458 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 HEXDCQ8WVB3 486 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 HERVK_113Q902F9 699 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 CDK5RAP1Q96SZ6 601 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 DUSP16Q9BY84 665 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 TRIM8Q9BZR9 551 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 SCPEP1Q9HB40 452 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 VTI1BQ9UEU0 232 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 GJD2Q9UKL4 321 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 DGKBQ9Y6T7 804 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 LAMA3Q16787 3333 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 RANBP2P49792 3224 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 ASB14A6NK59 587 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 NR5A2O00482 541 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 AURKAO14965 403 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 LRIG2O94898 1065 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 CD4P01730 458 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 MT-ND1P03886 318 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 CCNA2P20248 432 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 IL10P22301 178 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 YWHAQP27348 245 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 NPY2RP49146 381 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 MLLT6P55198 1093 aaPredicted RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 COPZ1P61923 177 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 HABP4Q5JVS0 413 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 HMBOX1Q6NT76 420 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 ZCCHC8Q6NZY4 707 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 CNSTQ6PJW8 725 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 UTS2BQ765I0 119 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 GLRX5Q86SX6 157 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 CAMK1DQ8IU85 385 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 SPPL2CQ8IUH8 684 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 DDIASQ8IXT1 998 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 ATPAF2Q8N5M1 289 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 TXNDC5Q8NBS9 432 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 DNAJB3Q8WWF6 145 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 METTL2AQ96IZ6 378 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 DEFB118Q96PH6 123 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 NPLQ9BXD5 320 aaPredicted RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 ANKRD60Q9BZ19 345 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 CLPBQ9H078 707 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 UNC93B1Q9H1C4 597 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 PIF1Q9H611 641 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 FBRSL1Q9HCM7 1045 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 CASS4Q9NQ75 786 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 GIMAP2Q9UG22 337 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 PCDHGA7Q9Y5G6 932 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 ST14Q9Y5Y6 855 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 DOCK3Q8IZD9 2030 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 POLR1CO15160 346 aaPredicted RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 MSI1O43347 362 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 LRPAP1P30533 357 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 HOXA11P31270 313 aaPredicted RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 TAGLNQ01995 201 aaKnown RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 FCHO2Q0JRZ9 810 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 MERTKQ12866 999 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 UGP2Q16851 508 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 ZIK1Q3SY52 487 aaPredicted RBP10.13□□□□□ -0.79
BRD9-209ENST00000490814 FBXO48Q5FWF7 155 aa10.13□□□□□ -0.79
BRD9-209ENST00000490814 PPP4R4Q6NUP7 873 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms