RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 GOLGA6AQ9NYA3 693 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 TAAR2Q9P1P5 351 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 PISDQ9UG56 409 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 PACSIN2Q9UNF0 486 aaPredicted RBP10.32□□□□□ -0.76
TTC28-207ENST00000490475 SLC17A4Q9Y2C5 497 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.32□□□□□ -0.76
TTC28-207ENST00000490475 RNF215Q9Y6U7 377 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 ATMQ13315 3056 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 FLNBO75369 2602 aaKnown RBP10.31□□□□□ -0.76
TTC28-207ENST00000490475 PIEZO2Q9H5I5 2752 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 A8MX80 341 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 B8ZZF3 427 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.31□□□□□ -0.76
TTC28-207ENST00000490475 J3QKU1 62 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 FTCDO95954 541 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 JCHAINP01591 159 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 CEACAM5P06731 702 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 PLA2G2AP14555 144 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 ZFXP17010 805 aaPredicted RBP10.31□□□□□ -0.76
TTC28-207ENST00000490475 GM2AP17900 193 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 CTNNA1P35221 906 aaKnown RBP10.31□□□□□ -0.76
TTC28-207ENST00000490475 ETV3P41162 512 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 MAXP61244 160 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 ITKQ08881 620 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 TFDP3Q5H9I0 405 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 MANEAQ5SRI9 462 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 PHF19Q5T6S3 580 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 DENND2CQ68D51 928 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 ALG1LQ6GMV1 187 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 AADACL2Q6P093 401 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 ADAMTSL4Q6UY14 1074 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 PEX26Q7Z412 305 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 CCDC50Q8IVM0 306 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 SLITRK4Q8IW52 837 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 RNF10Q8N5U6 811 aaKnown RBP10.31□□□□□ -0.76
TTC28-207ENST00000490475 OR4D9Q8NGE8 314 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 ALG3Q92685 438 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 SH3KBP1Q96B97 665 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 AP2M1Q96CW1 435 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 SCARF2Q96GP6 870 aaPredicted RBP10.31□□□□□ -0.76
TTC28-207ENST00000490475 ZNF830Q96NB3 372 aaPredicted RBP10.31□□□□□ -0.76
TTC28-207ENST00000490475 OR2M4Q96R27 311 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 ARHGAP9Q9BRR9 750 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 HERPUD2Q9BSE4 406 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 LZTFL1Q9NQ48 299 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 RBM22Q9NW64 420 aaKnown RBP eCLIP10.31□□□□□ -0.76
TTC28-207ENST00000490475 AMFRQ9UKV5 643 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 SUFUQ9UMX1 484 aa10.31□□□□□ -0.76
TTC28-207ENST00000490475 ZFC3H1O60293 1989 aaKnown RBP10.31□□□□□ -0.76
TTC28-207ENST00000490475 hCG_1818297A0A087WSY0 165 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 A0A0J9YYE9 177 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 RGSL1A5PLK6 1076 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 NPIPB15A6NHN6 443 aaPredicted RBP10.3□□□□□ -0.76
TTC28-207ENST00000490475 STMND1H3BQB6 276 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 KCNK1O00180 336 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 FZD6O60353 706 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 TRBC1P01850 177 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 FGF1P05230 155 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 PYGMP11217 842 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 PECAM1P16284 738 aaPredicted RBP10.3□□□□□ -0.76
TTC28-207ENST00000490475 LHCGRP22888 699 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 CTNNA2P26232 953 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 ALDH4A1P30038 563 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 ADCY8P40145 1251 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 GNPDA1P46926 289 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 ATP1A2P50993 1020 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 RWDD2BP57060 319 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 RAB15P59190 212 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 B4GALNT1Q00973 533 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 AP1B1Q10567 949 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 TRAF2Q12933 501 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 TFDP2Q14188 446 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 IHHQ14623 411 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 PDK1Q15118 436 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 TCEA2Q15560 299 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 PCSK4Q6UW60 755 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 Q6ZVL8 140 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 HSD11B1LQ7Z5J1 315 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 TECPR1Q7Z6L1 1165 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 GALNT13Q8IUC8 556 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 CCDC13Q8IYE1 715 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 AGBL5Q8NDL9 886 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 CCHCR1Q8TD31 782 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 PIH1D2Q8WWB5 315 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 MAML1Q92585 1016 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 HAUS1Q96CS2 278 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 RBM41Q96IZ5 413 aaKnown RBP10.3□□□□□ -0.76
TTC28-207ENST00000490475 TEFMQ96QE5 360 aaKnown RBP10.3□□□□□ -0.76
TTC28-207ENST00000490475 TAAR9Q96RI9 348 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 LYSMD1Q96S90 227 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 SEMA3CQ99985 751 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 ADGRE3Q9BY15 652 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 ASPSCR1Q9BZE9 553 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 EPB41L1Q9H4G0 881 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 RMI1Q9H9A7 625 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 RAD18Q9NS91 495 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 WDR70Q9NW82 654 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 VPS18Q9P253 973 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 PCDHGA3Q9Y5H0 932 aa10.3□□□□□ -0.76
TTC28-207ENST00000490475 CAPN6Q9Y6Q1 641 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms