RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TRAF3IP3Q9Y228 551 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 COQ4Q9Y3A0 265 aa7.07□□□□□ -1.28
PDLIM1-203ENST00000490391 A0A1B0GUH1 482 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 A6NL46 340 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 C19orf84I3L1E1 186 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 ZNF185O15231 689 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 GRID2O43424 1007 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 BUB1BO60566 1050 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 SPAG6O75602 509 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 RECQL5O94762 991 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 TMEM63AO94886 807 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 EML2O95834 649 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 MT-ND3P03897 115 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 MYCLP1P12525 358 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 KRT13P13646 458 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 EDN3P14138 238 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 NR2F2P24468 414 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 ADCY8P40145 1251 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 ACADSBP45954 432 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 GNPDA1P46926 289 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 NASPP49321 788 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 GFERP55789 205 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 YWHAEP62258 255 aaKnown RBP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 GNA12Q03113 381 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 RALGDSQ12967 914 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 ADAM9Q13443 819 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 RAPSNQ13702 412 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 IL11RAQ14626 422 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 STILQ15468 1287 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 UGP2Q16851 508 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 ANO6Q4KMQ2 910 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 CBWD6Q4V339 395 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 CBWD3Q5JTY5 395 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 CBWD5Q5RIA9 395 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 VWA5B1Q5TIE3 1220 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 FAM173BQ6P4H8 233 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 FAM199XQ6PEV8 388 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 ZSWIM9Q86XI8 627 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 PRIMA1Q86XR5 153 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 TGIF2LYQ8IUE0 185 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 RASGRP3Q8IV61 690 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 DMRTC2Q8IXT2 367 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 CBARPQ8N350 705 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 STK32AQ8WU08 396 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 OR6C1Q96RD1 312 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 KRTAP4-5Q9BYR2 181 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 ILKAPQ9H0C8 392 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 SUDS3Q9H7L9 328 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 MCCC2Q9HCC0 563 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 DLL4Q9NR61 685 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 AGPAT4Q9NRZ5 378 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 PIGVQ9NUD9 493 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 ARHGEF38Q9NXL2 777 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 SERTAD1Q9UHV2 236 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 MOSPD1Q9UJG1 213 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 SUFUQ9UMX1 484 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 RPH3AQ9Y2J0 694 aaPredicted RBP7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 MFHAS1Q9Y4C4 1052 aa7.06□□□□□ -1.28
PDLIM1-203ENST00000490391 DOCK10Q96BY6 2186 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 CFAP69A5D8W1 941 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 F5H423 210 aaPredicted RBP7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 INSIG1O15503 277 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 RHOBTB3O94955 611 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 C9P02748 559 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 GLI1P08151 1106 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 PLEKP08567 350 aaPredicted RBP7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 ACTR1BP42025 376 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 CXCR3P49682 368 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 EPHA4P54764 986 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 ACTR1AP61163 376 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 CEBPZQ03701 1054 aaKnown RBP7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 NME3Q13232 169 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 SLC39A14Q15043 492 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 POLD3Q15054 466 aaPredicted RBP7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 VWA2Q5GFL6 755 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 DCAF10Q5QP82 559 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 PNCKQ6P2M8 343 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 DENND1BQ6P3S1 775 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 LEKR1Q6ZMV7 388 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 MRGPRGQ86SM5 289 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 ZNF808Q8N4W9 903 aaPredicted RBP7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 IQUBQ8NA54 791 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 ACBD4Q8NC06 268 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 CCDC120Q96HB5 630 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 ELMO2Q96JJ3 720 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 C9orf72Q96LT7 481 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 GDAP1L1Q96MZ0 367 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 MED15Q96RN5 788 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 USP28Q96RU2 1077 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 SLX1AQ9BQ83 275 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 TTYH3Q9C0H2 523 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 TKTL2Q9H0I9 626 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 CXXC4Q9H2H0 198 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 MAGEF1Q9HAY2 307 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 SARS2Q9NP81 518 aaKnown RBP7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 TMEM63CQ9P1W3 806 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 G3BP2Q9UN86 482 aaKnown RBP7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 SLC17A4Q9Y2C5 497 aa7.05□□□□□ -1.28
PDLIM1-203ENST00000490391 ATP8A1Q9Y2Q0 1164 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms