RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ARF5P84085 180 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 ECT2LQ008S8 904 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 CTBP1Q13363 440 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 CAMK1Q14012 370 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 EIF4HQ15056 248 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PDGFRLQ15198 375 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 MAPRE2Q15555 327 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PITRM1Q5JRX3 1037 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 CDKL4Q5MAI5 379 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 HECTD2Q5U5R9 776 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PLPP4Q5VZY2 271 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 SEL1L3Q68CR1 1132 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 CDHR3Q6ZTQ4 885 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PTAR1Q7Z6K3 402 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 CLNKQ7Z7G1 428 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 CIR1Q86X95 450 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 C10orf107Q8IVU9 208 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 UNC5BQ8IZJ1 945 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 RBFAQ8N0V3 343 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 FSTL5Q8N475 847 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 FITM2Q8N6M3 262 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PLPP7Q8NBV4 271 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 NETO2Q8NC67 525 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 GALNT6Q8NCL4 622 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 LPCAT1Q8NF37 534 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 OR6Y1Q8NGX8 325 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 UCMAQ8WVF2 138 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 MCUR1Q96AQ8 359 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 ALG14Q96F25 216 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 ASIC4Q96FT7 647 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PDLIM5Q96HC4 596 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 UBXN10Q96LJ8 280 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 MAGEB10Q96LZ2 347 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 TBATAQ96M53 351 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PLEKHG4BQ96PX9 1271 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PANX3Q96QZ0 392 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 CYP2S1Q96SQ9 504 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 UHRF1Q96T88 793 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 OMDQ99983 421 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 CCDC28BQ9BUN5 200 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 TMEM120AQ9BXJ8 343 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 DERL2Q9GZP9 239 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 CLPBQ9H078 707 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 C1orf21Q9H246 121 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 ECT2Q9H8V3 914 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 SFXN1Q9H9B4 322 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 UGT1A7Q9HAW7 530 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 UGT1A10Q9HAW8 530 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 UGT1A8Q9HAW9 530 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 ZFYVE1Q9HBF4 777 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 ZNF334Q9HCZ1 680 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 SLCO1B3Q9NPD5 702 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 MAN1C1Q9NR34 630 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 ARHGEF3Q9NR81 526 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 SPHK2Q9NRA0 654 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 TMEM45AQ9NWC5 275 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PIH1D1Q9NWS0 290 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 TMEM216Q9P0N5 145 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 HEY2Q9UBP5 337 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 LHX3Q9UBR4 397 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 GNPTGQ9UJJ9 305 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PRDM4Q9UKN5 801 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 MKL2Q9ULH7 1088 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 CHKBQ9Y259 395 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 PPIL1Q9Y3C6 166 aa6.34□□□□□ -1.39
SF3A3-208ENST00000489537 MRPS23Q9Y3D9 190 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 TNPO3Q9Y5L0 923 aaKnown RBP6.34□□□□□ -1.39
SF3A3-208ENST00000489537 GREB1Q4ZG55 1949 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 A0A0J9YYE9 177 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CAPN8A6NHC0 703 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 WASH3PC4AMC7 463 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 G3V2L1 256 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 STX16-NPEPL1H3BU86 382 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 STX16O14662 325 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 PRMT5O14744 637 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 MSTNO14793 375 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CCL16O15467 120 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CLASP2O75122 1294 aaKnown RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 PIAS1O75925 651 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CSPG5O95196 566 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 MLYCDO95822 493 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CHEK2O96017 543 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 TRBC1P01850 177 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 S100BP04271 92 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 GSTM1P09488 218 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CCDC166P0CW27 439 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CBSLP0DN79 551 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 ENO3P13929 434 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 PKMP14618 531 aaKnown RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 NQO1P15559 274 aaKnown RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 AOC1P19801 751 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 IMPDH1P20839 514 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 SAT1P21673 171 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 XPAP23025 273 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-208ENST00000489537 DGKAP23743 735 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 ARNTP27540 789 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 CBSP35520 551 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 LTBRP36941 435 aa6.33□□□□□ -1.4
SF3A3-208ENST00000489537 SPAM1P38567 509 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms