RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 FAF2Q96CS3 445 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 TAAR9Q96RI9 348 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 LYSMD1Q96S90 227 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 RIOK2Q9BVS4 552 aaKnown RBP11.67□□□□□ -0.54
ACTN4-206ENST00000489451 POLR1EQ9GZS1 481 aaKnown RBP11.67□□□□□ -0.54
ACTN4-206ENST00000489451 CDH19Q9H159 772 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 TBC1D29Q9UFV1 150 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 IP6K2Q9UHH9 426 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 ZNF106Q9H2Y7 1883 aaKnown RBP11.67□□□□□ -0.54
ACTN4-206ENST00000489451 CREBBPQ92793 2442 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 ABCA12Q86UK0 2595 aa11.67□□□□□ -0.54
ACTN4-206ENST00000489451 RELNP78509 3460 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 A0A1W2PQJ5 194 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 STMND1H3BQB6 276 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 MATN3O15232 486 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 CBFA2T2O43439 604 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 SUV39H1O43463 412 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 ZNF30P17039 623 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 GBE1Q04446 702 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 TRA2AQ13595 282 aaKnown RBP eCLIP11.66□□□□□ -0.54
ACTN4-206ENST00000489451 KRT81Q14533 505 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 ANKRD20A8PQ5CZ79 823 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 ANKS6Q68DC2 871 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 BBS5Q8N3I7 341 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 SYN2Q92777 582 aaPredicted RBP11.66□□□□□ -0.54
ACTN4-206ENST00000489451 FATE1Q969F0 183 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 TSGA13Q96PP4 275 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 DDA1Q9BW61 102 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 BRD8Q9H0E9 1235 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 TSPY26PQ9H489 355 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 RBM22Q9NW64 420 aaKnown RBP eCLIP11.66□□□□□ -0.54
ACTN4-206ENST00000489451 DTLQ9NZJ0 730 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 SEPT10Q9P0V9 454 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 IFNKQ9P0W0 207 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 LUC7L2Q9Y383 392 aaKnown RBP11.66□□□□□ -0.54
ACTN4-206ENST00000489451 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.66□□□□□ -0.544e-8■■■□□ 16.3
ACTN4-206ENST00000489451 ADGRG1Q9Y653 693 aa11.66□□□□□ -0.54
ACTN4-206ENST00000489451 EFCAB7A8K855 629 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 GYPCP04921 128 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 SERPING1P05155 500 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 GJC1P36383 396 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 SPINT3P49223 89 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 ZBED6P86452 979 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 ITKQ08881 620 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 ZBTB17Q13105 803 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 QPCTQ16769 361 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 ZNF648Q5T619 568 aaPredicted RBP11.65□□□□□ -0.54
ACTN4-206ENST00000489451 TMEM71Q6P5X7 295 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 XKR5Q6UX68 686 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 TIPARPQ7Z3E1 657 aaKnown RBP11.65□□□□□ -0.54
ACTN4-206ENST00000489451 ARHGAP22Q7Z5H3 698 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 GALNT13Q8IUC8 556 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 LRRC49Q8IUZ0 686 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 NRSN1Q8IZ57 195 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 CNTD1Q8N815 330 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 AGBL5Q8NDL9 886 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 LPCAT1Q8NF37 534 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 NSMCE1Q8WV22 266 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 CPLX3Q8WVH0 158 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 ZNF670Q9BS34 389 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 PACSIN1Q9BY11 444 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 PCDH9Q9HC56 1237 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 APMAPQ9HDC9 416 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 KCNK6Q9Y257 313 aa11.65□□□□□ -0.54
ACTN4-206ENST00000489451 B4E171 279 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 DUX1O43812 170 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 RAD1O60671 282 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 TPM1P09493 284 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 CCNCP24863 283 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 NFKBIAP25963 317 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 TSPAN7P41732 249 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 GPLD1P80108 840 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 LRP8Q14114 963 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 TMEM164Q5U3C3 297 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 ALKBH5Q6P6C2 394 aaKnown RBP11.64□□□□□ -0.55
ACTN4-206ENST00000489451 IYDQ6PHW0 289 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 EXD1Q8NHP7 514 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 ZNF564Q8TBZ8 553 aaPredicted RBP11.64□□□□□ -0.55
ACTN4-206ENST00000489451 RAPGEF5Q92565 580 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 HDAC11Q96DB2 347 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 RTP4Q96DX8 246 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 TRIB3Q96RU7 358 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 CTRCQ99895 268 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 ARHGAP9Q9BRR9 750 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 ARFGAP3Q9NP61 516 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 GEMIN8Q9NWZ8 242 aaKnown RBP11.64□□□□□ -0.55
ACTN4-206ENST00000489451 SLC39A1Q9NY26 324 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 OGFRQ9NZT2 677 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 SCHIP1Q9P0W5 487 aaPredicted RBP11.64□□□□□ -0.55
ACTN4-206ENST00000489451 VPS18Q9P253 973 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 PILRAQ9UKJ1 303 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 CAPN11Q9UMQ6 739 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 TTLL3Q9Y4R7 772 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 PCDHB11Q9Y5F2 797 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 NOTCH2Q04721 2471 aa11.64□□□□□ -0.55
ACTN4-206ENST00000489451 C2CD3Q4AC94 2353 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 NBPF19A0A087WUL8 3843 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 C1orf232A0A0U1RR37 186 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 LOC101059948A0A1B0GTJ6 334 aa11.63□□□□□ -0.55
ACTN4-206ENST00000489451 PRR19A6NJB7 356 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms