RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CXCR3P49682 368 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 AQP4P55087 323 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 POU5F1Q01860 360 aaKnown RBP17.54■□□□□ 0.4
NPHP4-209ENST00000489180 DSC2Q02487 901 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 OR52J3Q8NH60 311 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 AP3S1Q92572 193 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 FAM105AQ9NUU6 356 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 INTS7Q9NVH2 962 aaKnown RBP17.54■□□□□ 0.4
NPHP4-209ENST00000489180 EFR3BQ9Y2G0 817 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 SH3GLB1Q9Y371 365 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 AMD1P17707 334 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 CAPGP40121 348 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 MTTPP55157 894 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 CYP4F8P98187 520 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 MYBPC1Q00872 1141 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 THAP5Q7Z6K1 395 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 C1GALT1C1Q96EU7 318 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 COX4I2Q96KJ9 171 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 ZNF558Q96NG5 402 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 HBEGFQ99075 208 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 CCDC28BQ9BUN5 200 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 TTYH3Q9C0H2 523 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 GBA3Q9H227 469 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 HMX1Q9NP08 348 aaPredicted RBP17.54■□□□□ 0.4
NPHP4-209ENST00000489180 EQTNQ9NQ60 294 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 MROH1Q8NDA8 1641 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 AIF1P55008 147 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 PITRM1Q5JRX3 1037 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 BTN2A1Q7KYR7 527 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 FAM98AQ8NCA5 519 aaKnown RBP17.54■□□□□ 0.4
NPHP4-209ENST00000489180 NKD2Q969F2 451 aaPredicted RBP17.54■□□□□ 0.4
NPHP4-209ENST00000489180 DHX33Q9H6R0 707 aaKnown RBP17.54■□□□□ 0.4
NPHP4-209ENST00000489180 PRKAB1Q9Y478 270 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 B4GALT4O60513 344 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 TRMUO75648 421 aaKnown RBP17.54■□□□□ 0.4
NPHP4-209ENST00000489180 LYPLA2O95372 231 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 CHRNB2P17787 502 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 ZNF567Q8N184 647 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 EBF3Q9H4W6 596 aa17.54■□□□□ 0.4
NPHP4-209ENST00000489180 RPRD1BQ9NQG5 326 aaKnown RBP17.54■□□□□ 0.4
NPHP4-209ENST00000489180 MST1RQ04912 1400 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 CWF19L1Q69YN2 538 aaKnown RBP17.53■□□□□ 0.4
NPHP4-209ENST00000489180 RHOBTB2Q9BYZ6 727 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 LGALS13Q9UHV8 139 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 PPLO60437 1756 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.53■□□□□ 0.4
NPHP4-209ENST00000489180 FPGTO14772 594 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 GNPDA1P46926 289 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 ACLYP53396 1101 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 FSTL4Q6MZW2 842 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 ELL3Q9HB65 397 aaPredicted RBP17.53■□□□□ 0.4
NPHP4-209ENST00000489180 GMIPQ9P107 970 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 GSAPA4D1B5 854 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 FAM25EA8MYX2 175 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 E9PAM4 449 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 ZW10O43264 779 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 UGT2B17O75795 530 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 METTL18O95568 372 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 NR2F6P10588 404 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 OMPP47874 163 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 IL23RQ5VWK5 629 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 FAM171BQ6P995 826 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 RAVER1Q8IY67 606 aaKnown RBP17.53■□□□□ 0.4
NPHP4-209ENST00000489180 OR10G6Q8NH81 332 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 ALG2Q9H553 416 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 RIPK3Q9Y572 518 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 SMIM28A0A1B0GU29 152 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 ACSL4O60488 711 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 PKMP14618 531 aaKnown RBP17.53■□□□□ 0.4
NPHP4-209ENST00000489180 CPNE8Q86YQ8 564 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 TBATAQ96M53 351 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 MRIQ9BWK5 157 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 SLC39A8Q9C0K1 460 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 GRHL1Q9NZI5 618 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 RAPGEFL1Q9UHV5 662 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 GIT1Q9Y2X7 761 aa17.53■□□□□ 0.4
NPHP4-209ENST00000489180 ABHD14A-ACY1A0A1B0GW23 586 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 AP2A1O95782 977 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 LIMK2P53671 638 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 TATDN1Q6P1N9 297 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 KLHL24Q6TFL4 600 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 PEG10Q86TG7 708 aaKnown RBP17.52■□□□□ 0.4
NPHP4-209ENST00000489180 MON1AQ86VX9 555 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 PARGQ86W56 976 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 GPR20Q99678 358 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 SMPD3Q9NY59 655 aaPredicted RBP17.52■□□□□ 0.4
NPHP4-209ENST00000489180 GPC6Q9Y625 555 aaPredicted RBP17.52■□□□□ 0.4
NPHP4-209ENST00000489180 FAM92AA1XBS5 289 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 SKP1P63208 163 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 FAM182AQ5T1J6 154 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 TMPRSS11BQ86T26 416 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 GPR65Q8IYL9 337 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 TFAP2BQ92481 460 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 THRBP10828 461 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 USP41Q3LFD5 358 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 C1orf127Q8N9H9 656 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 AGAP2Q99490 1192 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 SPATA31D1Q6ZQQ2 1576 aa17.52■□□□□ 0.4
NPHP4-209ENST00000489180 RGS10O43665 173 aa17.52■□□□□ 0.39
NPHP4-209ENST00000489180 COL6A2P12110 1019 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms