RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 ACOX1Q15067 660 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TOMM20Q15388 145 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TAF5Q15542 800 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TRIP6Q15654 476 aaKnown RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 SNRNP35Q16560 246 aaKnown RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 AASDHQ4L235 1098 aaPredicted RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 EPC2Q52LR7 807 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 XKR3Q5GH77 459 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TMTC4Q5T4D3 741 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 NAA35Q5VZE5 725 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 ABLIM2Q6H8Q1 611 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 ZNF280DQ6N043 979 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 HIBCHQ6NVY1 386 aaPredicted RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 PGBD2Q6P3X8 592 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 LEKR1Q6ZMV7 388 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 KIAA0408Q6ZU52 694 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 ANO5Q75V66 913 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 ARMC9Q7Z3E5 817 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 CBWD2Q8IUF1 395 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 CCDC60Q8IWA6 550 aaPredicted RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 ZBTB8OSQ8IWT0 167 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 SYTL1Q8IYJ3 562 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 FSTL5Q8N475 847 aaPredicted RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 UBL4BQ8N7F7 174 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.97□□□□□ -1.93
CALD1-221ENST00000489019 CCDC89Q8N998 374 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 ZNF527Q8NB42 609 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TMEM161BQ8NDZ6 487 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 FBXL13Q8NEE6 735 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 AFAP1L1Q8TED9 768 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 DENND1AQ8TEH3 1009 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TCP11Q8WWU5 503 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 SEPT1Q8WYJ6 367 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 RFFLQ8WZ73 363 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TMEM143Q96AN5 459 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 ZNF653Q96CK0 615 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 VPS50Q96JG6 964 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TBATAQ96M53 351 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 INPP4AQ96PE3 977 aaPredicted RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 NAP1L3Q99457 506 aaPredicted RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 FAM118BQ9BPY3 351 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TCHPQ9BT92 498 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 STRA6Q9BX79 667 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 AP1M1Q9BXS5 423 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 SPATC1LQ9H0A9 340 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TMEM117Q9H0C3 514 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 THAP2Q9H0W7 228 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 VIPAS39Q9H9C1 493 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 EPB41L5Q9HCM4 733 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TMEM8AQ9HCN3 771 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 ZCCHC17Q9NP64 241 aaKnown RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 MED4Q9NPJ6 270 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 ITM2CQ9NQX7 267 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 STARD7Q9NQZ5 370 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 RAB20Q9NX57 234 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 TUBA8Q9NY65 449 aaPredicted RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 ELOVL5Q9NYP7 299 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 SEMA5BQ9P283 1151 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 GRHPRQ9UBQ7 328 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 RASAL2Q9UJF2 1139 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 AGO2Q9UKV8 859 aaKnown RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 HPCAL4Q9UM19 191 aa2.97□□□□□ -1.93
CALD1-221ENST00000489019 UTP11Q9Y3A2 253 aaKnown RBP2.97□□□□□ -1.93
CALD1-221ENST00000489019 MYH11P35749 1972 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.96□□□□□ -1.94
CALD1-221ENST00000489019 C16orf96A6NNT2 1141 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 H3BQF6 201 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 J3KRW8 73 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 CXCL11O14625 94 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 APOL1O14791 398 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 DSCR3O14972 297 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 RAD51CO43502 376 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 TIMM44O43615 452 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 EXTL3O43909 919 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 ZC3H11AO75152 810 aaKnown RBP eCLIP2.96□□□□□ -1.94
CALD1-221ENST00000489019 GGPS1O95749 300 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 NDST3O95803 873 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 CSTBP04080 98 aaKnown RBP2.96□□□□□ -1.94
CALD1-221ENST00000489019 ADRB2P07550 413 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 TMIGD3P0DMS9 266 aaPredicted RBP2.96□□□□□ -1.94
CALD1-221ENST00000489019 CYP11B1P15538 503 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 SCP2P22307 547 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 UBA1P22314 1058 aaKnown RBP2.96□□□□□ -1.94
CALD1-221ENST00000489019 MST1P26927 711 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 GABRB3P28472 473 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 MAPK4P31152 587 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 TCF7P36402 384 aaPredicted RBP2.96□□□□□ -1.94
CALD1-221ENST00000489019 NAMPTP43490 491 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 MMP13P45452 471 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 ACOT2P49753 483 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 YPEL5P62699 121 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 RAE1P78406 368 aaKnown RBP2.96□□□□□ -1.94
CALD1-221ENST00000489019 TXNL4AP83876 142 aaKnown RBP2.96□□□□□ -1.94
CALD1-221ENST00000489019 CFHR1Q03591 330 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 PPFIA1Q13136 1202 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 TRPC3Q13507 836 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 TFDP1Q14186 410 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 TAF12Q16514 161 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 ODF2Q5BJF6 829 aa2.96□□□□□ -1.94
CALD1-221ENST00000489019 CFAP58Q5T655 872 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms