RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 ECI2O75521 394 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 FAM58BPP0C7Q3 252 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 UFM1P61960 85 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 RHDQ02161 417 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 CREB5Q02930 508 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 TNK2Q07912 1038 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 NFE2Q16621 373 aaPredicted RBP12.61□□□□□ -0.39
CLIC4-202ENST00000488683 OR2T11Q8NH01 316 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 EEF1AKMT1Q8WVE0 214 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 CDKN2AIPNLQ96HQ2 116 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 POLR1EQ9GZS1 481 aaKnown RBP12.61□□□□□ -0.39
CLIC4-202ENST00000488683 MUC3BQ9H195 1237 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 PDFQ9HBH1 243 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 IL37Q9NZH6 218 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 FKBPLQ9UIM3 349 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 FAM92AA1XBS5 289 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 SNAP91O60641 907 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 PRAMEF11O60813 436 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 IGLV3-27P01718 113 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 TACR2P21452 398 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 GKP32189 559 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 MAPK10P53779 464 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 NFKB2Q00653 900 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 MAPRE2Q15555 327 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 PTPRNQ16849 979 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 MAP7D1Q3KQU3 841 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 AP1ARQ63HQ0 302 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 TRAF7Q6Q0C0 670 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 RALGPS2Q86X27 583 aaPredicted RBP12.61□□□□□ -0.39
CLIC4-202ENST00000488683 DHFR2Q86XF0 187 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 PHYKPLQ8IUZ5 450 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 OR52B6Q8NGF0 335 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 ATOH8Q96SQ7 321 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 SEPHS2Q99611 448 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 SLC25A23Q9BV35 468 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 NACA2Q9H009 215 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 ASPDHA6ND91 283 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 CRCPO75575 148 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 CTPS1P17812 591 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 YAP1P46937 504 aaKnown RBP12.61□□□□□ -0.39
CLIC4-202ENST00000488683 HK3P52790 923 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 STX1BP61266 288 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 PRKCQQ04759 706 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 PPP1R8Q12972 351 aaKnown RBP12.61□□□□□ -0.39
CLIC4-202ENST00000488683 RPS6KA2Q15349 733 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 RBBP7Q16576 425 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 TCTN1Q2MV58 587 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 FAM26DQ5JW98 314 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 GLT6D1Q7Z4J2 308 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 SYVN1Q86TM6 617 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 SLC15A3Q8IY34 581 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 CLYBLQ8N0X4 340 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 ARHGAP18Q8N392 663 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 CBR4Q8N4T8 237 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 CDYL2Q8N8U2 506 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 GABPB2Q8TAK5 448 aaPredicted RBP12.61□□□□□ -0.39
CLIC4-202ENST00000488683 BCL7CQ8WUZ0 217 aaPredicted RBP12.61□□□□□ -0.39
CLIC4-202ENST00000488683 TRMOQ9BU70 441 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 SLC2A11Q9BYW1 496 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 LTB4R2Q9NPC1 389 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 INTS7Q9NVH2 962 aaKnown RBP12.61□□□□□ -0.39
CLIC4-202ENST00000488683 EIF2B4Q9UI10 523 aaKnown RBP12.61□□□□□ -0.39
CLIC4-202ENST00000488683 SQORQ9Y6N5 450 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 VCANP13611 3396 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 CHD7Q9P2D1 2997 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 TCRBV3S1A0A5B6 114 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 FXYD1O00168 92 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 RPP40O75818 363 aaKnown RBP12.6□□□□□ -0.39
CLIC4-202ENST00000488683 ATF6P18850 670 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 PAX3P23760 479 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 HOXD9P28356 352 aaPredicted RBP12.6□□□□□ -0.39
CLIC4-202ENST00000488683 SLC26A3P40879 764 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 STC1P52823 247 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 NKX3-2P78367 333 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 CLCQ05315 142 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 PARP15Q460N3 678 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 TIGD2Q4W5G0 525 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 TBCELQ5QJ74 424 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 ZBTB49Q6ZSB9 765 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 TMCO2Q7Z6W1 182 aaPredicted RBP12.6□□□□□ -0.39
CLIC4-202ENST00000488683 EPHX4Q8IUS5 362 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 NAT16Q8N8M0 369 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 FAM47BQ8NA70 645 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 CATSPER1Q8NEC5 780 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 FBXL20Q96IG2 436 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 FEM1CQ96JP0 617 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 RNF186Q9NXI6 227 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 MAGED1Q9Y5V3 778 aaPredicted RBP12.6□□□□□ -0.39
CLIC4-202ENST00000488683 MTMR11A4FU01 709 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 FGF1P05230 155 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 SUOXP51687 545 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 SLC44A4Q53GD3 710 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 PYCR3Q53H96 274 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 ZRANB3Q5FWF4 1079 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 SLC24A5Q71RS6 500 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 FBXO39Q8N4B4 442 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 GPR150Q8NGU9 434 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 BRSK1Q8TDC3 778 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 TRIB3Q96RU7 358 aa12.6□□□□□ -0.39
CLIC4-202ENST00000488683 AARSD1Q9BTE6 412 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms