RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 LACTB2Q53H82 288 aaPredicted RBP18.89■□□□□ 0.61
GGPS1-206ENST00000488594 TIPARPQ7Z3E1 657 aaKnown RBP18.89■□□□□ 0.61
GGPS1-206ENST00000488594 UNC5BQ8IZJ1 945 aa18.89■□□□□ 0.61
GGPS1-206ENST00000488594 ESX1Q8N693 406 aa18.89■□□□□ 0.61
GGPS1-206ENST00000488594 HSPH1Q92598 858 aa18.89■□□□□ 0.61
GGPS1-206ENST00000488594 ABHD17AQ96GS6 310 aa18.89■□□□□ 0.61
GGPS1-206ENST00000488594 RIOK2Q9BVS4 552 aaKnown RBP18.89■□□□□ 0.61
GGPS1-206ENST00000488594 NT5MQ9NPB1 228 aa18.89■□□□□ 0.61
GGPS1-206ENST00000488594 HAUS2Q9NVX0 235 aa18.89■□□□□ 0.61
GGPS1-206ENST00000488594 TBC1D29Q9UFV1 150 aa18.89■□□□□ 0.61
GGPS1-206ENST00000488594 FLNCQ14315 2725 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 KIR2DS5A0A0G2JLQ3 304 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 A0A0G2JNG1 304 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 A0A0U1RQS6 177 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 OR5K4A6NMS3 321 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 KIR2DS3K7RE56 304 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 DNAJC6O75061 913 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 TCN2P20062 427 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 CA4P22748 312 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 ITKQ08881 620 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 KIR2DS5Q14953 304 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 ASIC2Q16515 512 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 DEFB109BQ30KR1 87 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 SASS6Q6UVJ0 657 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 CHST15Q7LFX5 561 aaPredicted RBP18.88■□□□□ 0.61
GGPS1-206ENST00000488594 PLXDC1Q8IUK5 500 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 TEKT4Q8WW24 435 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 AGAP2Q99490 1192 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 HAUS4Q9H6D7 363 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 KCTD3Q9Y597 815 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 LRRK2Q5S007 2527 aa18.88■□□□□ 0.61
GGPS1-206ENST00000488594 ZFC3H1O60293 1989 aaKnown RBP18.87■□□□□ 0.61
GGPS1-206ENST00000488594 LRRC53A6NM62 1247 aa18.87■□□□□ 0.61
GGPS1-206ENST00000488594 DLGAP3O95886 979 aa18.87■□□□□ 0.61
GGPS1-206ENST00000488594 ANKRD34CP0C6C1 535 aa18.87■□□□□ 0.61
GGPS1-206ENST00000488594 RARAP10276 462 aa18.87■□□□□ 0.61
GGPS1-206ENST00000488594 F3P13726 295 aa18.87■□□□□ 0.61
GGPS1-206ENST00000488594 STAT5AP42229 794 aa18.87■□□□□ 0.61
GGPS1-206ENST00000488594 RPL26P61254 145 aaKnown RBP18.87■□□□□ 0.61
GGPS1-206ENST00000488594 PIGHQ14442 188 aaPredicted RBP18.87■□□□□ 0.61
GGPS1-206ENST00000488594 LYSMD3Q7Z3D4 306 aa18.87■□□□□ 0.61
GGPS1-206ENST00000488594 FAM26EQ8N5C1 309 aa18.87■□□□□ 0.61
GGPS1-206ENST00000488594 APMAPQ9HDC9 416 aa18.87■□□□□ 0.61
GGPS1-206ENST00000488594 RCOR3Q9P2K3 495 aaPredicted RBP18.87■□□□□ 0.61
GGPS1-206ENST00000488594 RPL26L1Q9UNX3 145 aaKnown RBP18.87■□□□□ 0.61
GGPS1-206ENST00000488594 GTF3C3Q9Y5Q9 886 aa18.87■□□□□ 0.61
GGPS1-206ENST00000488594 A6NCN8 305 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 PRR19A6NJB7 356 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 ATP1A1P05023 1023 aaKnown RBP18.86■□□□□ 0.61
GGPS1-206ENST00000488594 MAPK9P45984 424 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 KLRB1Q12918 225 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 STX1AQ16623 288 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 ALG1LQ6GMV1 187 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 ZNF571Q7Z3V5 609 aaPredicted RBP18.86■□□□□ 0.61
GGPS1-206ENST00000488594 LYSMD1Q96S90 227 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 TDRD1Q9BXT4 1180 aaKnown RBP18.86■□□□□ 0.61
GGPS1-206ENST00000488594 PCDH18Q9HCL0 1135 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 AIPL1Q9NZN9 384 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 MYO1AQ9UBC5 1043 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 AMACRQ9UHK6 382 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 KCNK6Q9Y257 313 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 PRKAB1Q9Y478 270 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 PCDHB3Q9Y5E6 796 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 RPS6KL1Q9Y6S9 549 aa18.86■□□□□ 0.61
GGPS1-206ENST00000488594 MN1Q10571 1320 aaPredicted RBP18.85■□□□□ 0.61
GGPS1-206ENST00000488594 LILRA5A6NI73 299 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 DDX3XO00571 662 aaKnown RBP eCLIP18.85■□□□□ 0.617e-7■■■■□ 20.7
GGPS1-206ENST00000488594 ACP5P13686 325 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 TCF4P15884 667 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 PRKCIP41743 596 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 TIGD7Q6NT04 549 aaPredicted RBP18.85■□□□□ 0.61
GGPS1-206ENST00000488594 C16orf46Q6P387 395 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 PHYKPLQ8IUZ5 450 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 FATE1Q969F0 183 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 SMIM14Q96QK8 99 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 ULBP3Q9BZM4 244 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 HSD3B7Q9H2F3 369 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 UCK1Q9HA47 277 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 SIDT1Q9NXL6 827 aaKnown RBP18.85■□□□□ 0.61
GGPS1-206ENST00000488594 CPNE7Q9UBL6 633 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 KLHL3Q9UH77 587 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 CNOT6Q9ULM6 557 aaKnown RBP18.85■□□□□ 0.61
GGPS1-206ENST00000488594 CHKBQ9Y259 395 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 MAN2B2Q9Y2E5 1009 aa18.85■□□□□ 0.61
GGPS1-206ENST00000488594 PCYT1BQ9Y5K3 369 aaPredicted RBP18.85■□□□□ 0.61
GGPS1-206ENST00000488594 OAS3Q9Y6K5 1087 aaKnown RBP18.85■□□□□ 0.61
GGPS1-206ENST00000488594 RGSL1A5PLK6 1076 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 TOX3O15405 576 aaPredicted RBP18.84■□□□□ 0.61
GGPS1-206ENST00000488594 SNX2O60749 519 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 GARSP41250 739 aaKnown RBP18.84■□□□□ 0.61
GGPS1-206ENST00000488594 ZNF165P49910 485 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 GALNT2Q10471 571 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 KRT81Q14533 505 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 HENMT1Q5T8I9 393 aaKnown RBP18.84■□□□□ 0.61
GGPS1-206ENST00000488594 ATCAYQ86WG3 371 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 NIPA2Q8N8Q9 360 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 MAML1Q92585 1016 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 ISCUQ9H1K1 167 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 CARD9Q9H257 536 aa18.84■□□□□ 0.61
GGPS1-206ENST00000488594 FAM83DQ9H4H8 585 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms