RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 KCTD20Q7Z5Y7 419 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZBTB46Q86UZ6 589 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 C10orf107Q8IVU9 208 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 AQP12AQ8IXF9 295 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 LGI2Q8N0V4 545 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 FBXL6Q8N531 539 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 MYCT1Q8N699 235 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 BPIFB6Q8NFQ5 453 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 RHOXF1Q8NHV9 184 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ACTL9Q8TC94 416 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 MAPK15Q8TD08 544 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TGFBRAP1Q8WUH2 860 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 USP13Q92995 863 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 COA7Q96BR5 231 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 RTP4Q96DX8 246 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 FBXL20Q96IG2 436 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 RNF170Q96K19 258 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 RIPOR3Q96MK2 946 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 DACH2Q96NX9 599 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 NT5C1BQ96P26 610 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TWNKQ96RR1 684 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 IER2Q9BTL4 223 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 FUNDC2Q9BWH2 189 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 CALN1Q9BXU9 219 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 KCNN2Q9H2S1 579 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF304Q9HCX3 659 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TM9SF3Q9HD45 589 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TUFT1Q9NNX1 390 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 C12orf4Q9NQ89 552 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 NECTIN3Q9NQS3 549 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TBC1D22BQ9NU19 505 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 C20orf96Q9NUD7 363 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SMPD3Q9NY59 655 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SEPT10Q9P0V9 454 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 HMGXB4Q9UGU5 601 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 DCDC2Q9UHG0 476 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SBF2Q86WG5 1849 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 TCRBV5S1A1TA0A578 114 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 BLACEA4D250 179 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 TMEM191CA6NGB0 347 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 PI4K2BG5E9Z4 385 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 H0Y8X5 98 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 STX16-NPEPL1H3BU86 382 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 MEIS1O00470 390 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 HDAC3O15379 428 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 NDUFA2O43678 99 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 SIGLEC6O43699 453 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 GAS7O60861 476 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 CCNKO75909 580 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 ALDOAP04075 364 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 PRNPP04156 253 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 TMEM191BP0C7N4 346 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF865P0CJ78 1059 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 FCGR1AP12314 374 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 AKR1B1P15121 316 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 CD1EP15812 388 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 TCF4P15884 667 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 RPL17P18621 184 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 CFL1P23528 166 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 HTR1BP28222 390 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 RBL1P28749 1068 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 MSX2P35548 267 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 OR3A3P47888 321 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 MLLT6P55198 1093 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 PSME3P61289 254 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 GHRHRQ02643 423 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 TNFAIP2Q03169 654 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 ART3Q13508 389 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 DPYSL3Q14195 570 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 TAF5Q15542 800 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 GPR162Q16538 588 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 DGUOKQ16854 277 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 C5orf22Q49AR2 442 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 SAMD4BQ5PRF9 694 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 NOL9Q5SY16 702 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 STEAP4Q687X5 459 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 DENND5AQ6IQ26 1287 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 PMF1Q6P1K2 205 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 DCUN1D2Q6PH85 259 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 SYCE2Q6PIF2 218 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 KCNT2Q6UVM3 1135 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 C15orf52Q6ZUT6 534 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 PIWIL3Q7Z3Z3 882 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLCO6A1Q86UG4 719 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF444Q8N0Y2 327 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 DHRSXQ8N5I4 330 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 LINC00469Q8N7U9 141 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF781Q8N8C0 355 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 XXYLT1Q8NBI6 393 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 MCUQ8NE86 351 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 IL17RDQ8NFM7 739 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 OR2T34Q8NGX1 318 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 OR2T3Q8NH03 318 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZSCAN18Q8TBC5 510 aaPredicted RBP4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 FEZF2Q8TBJ5 459 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 DYNC2LI1Q8TCX1 351 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 RSAD2Q8WXG1 361 aa4.74□□□□□ -1.65
CDC42BPA-213ENST00000488131 FIG4Q92562 907 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms