RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 PTCD2Q8WV60 388 aaKnown RBP14.53□□□□□ -0.08
LIMS3-205ENST00000487150 HEXDCQ8WVB3 486 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 OR1E3Q8WZA6 343 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 TSACCQ96A04 125 aaPredicted RBP14.53□□□□□ -0.08
LIMS3-205ENST00000487150 SCARF2Q96GP6 870 aaPredicted RBP14.53□□□□□ -0.08
LIMS3-205ENST00000487150 CNDP2Q96KP4 475 aaKnown RBP14.53□□□□□ -0.08
LIMS3-205ENST00000487150 CAPZA3Q96KX2 299 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 TTC25Q96NG3 672 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 OR2M4Q96R27 311 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 RANBP9Q96S59 729 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 LGR4Q9BXB1 951 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 IL22Q9GZX6 179 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 CYP4F12Q9HCS2 524 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 IL26Q9NPH9 171 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 PCYOX1Q9UHG3 505 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 RIMKLBQ9ULI2 386 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 PCDHGA1Q9Y5H4 931 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 ARL5AQ9Y689 179 aa14.53□□□□□ -0.08
LIMS3-205ENST00000487150 FADS2P1A8MWK0 482 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 H7C0S8 307 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 INPP4BO15327 924 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 FFAR2O15552 330 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 CEACAM5P06731 702 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 ZSCAN5DPP0CG00 497 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 RALBP11234 206 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 SIM1P81133 766 aaPredicted RBP14.52□□□□□ -0.09
LIMS3-205ENST00000487150 FOXK2Q01167 660 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 CKAP4Q07065 602 aaKnown RBP14.52□□□□□ -0.09
LIMS3-205ENST00000487150 BNIP3Q12983 259 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 ILKQ13418 452 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 POU6F1Q14863 301 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 TTC27Q6P3X3 843 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 DOK6Q6PKX4 331 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 FAM151BQ6UXP7 276 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 SYT10Q6XYQ8 523 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 KDM7AQ6ZMT4 941 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 PCGF5Q86SE9 256 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 RBFAQ8N0V3 343 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 PELI3Q8N2H9 469 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 SLC25A45Q8N413 288 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 EID2Q8N6I1 236 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 PPHLN1Q8NEY8 458 aaKnown RBP14.52□□□□□ -0.09
LIMS3-205ENST00000487150 OR4K2Q8NGD2 314 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 OR52K1Q8NGK4 314 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 GDAP1Q8TB36 358 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 NAT6Q93015 286 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.52□□□□□ -0.09
LIMS3-205ENST00000487150 TTC1Q99614 292 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 TRIM39Q9HCM9 518 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 XAB2Q9HCS7 855 aaKnown RBP14.52□□□□□ -0.09
LIMS3-205ENST00000487150 BPIFA1Q9NP55 256 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 CASS4Q9NQ75 786 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 SMARCAL1Q9NZC9 954 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 BFARQ9NZS9 450 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 KLF15Q9UIH9 416 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 SUFUQ9UMX1 484 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 SLC30A1Q9Y6M5 507 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 LAMA1P25391 3075 aa14.52□□□□□ -0.09
LIMS3-205ENST00000487150 KLHL33A6NCF5 533 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 CFAP99D6REC4 459 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 F8W8V4 182 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 SMAPO00193 183 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 ETS1P14921 441 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 CKMT2P17540 419 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 VCLP18206 1134 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 ADRA1DP25100 572 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 GNPDA1P46926 289 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 DAB2P98082 770 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 NFATC2Q13469 925 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 TUBB2AQ13885 445 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 DHX34Q14147 1143 aaKnown RBP14.51□□□□□ -0.09
LIMS3-205ENST00000487150 GPR33Q49SQ1 333 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 C6orf132Q5T0Z8 1188 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 NYAP1Q6ZVC0 841 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 ARL10Q8N8L6 244 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 GLIS1Q8NBF1 620 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 DDHD1Q8NEL9 900 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 OR6C4Q8NGE1 309 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 ZNF514Q96K75 400 aaPredicted RBP14.51□□□□□ -0.09
LIMS3-205ENST00000487150 C16orf45Q96MC5 204 aaPredicted RBP14.51□□□□□ -0.09
LIMS3-205ENST00000487150 AGAP2Q99490 1192 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 TUBB2BQ9BVA1 445 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 NLE1Q9NVX2 485 aaPredicted RBP14.51□□□□□ -0.09
LIMS3-205ENST00000487150 UCKL1Q9NWZ5 548 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 ASIC3Q9UHC3 531 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 BTBD3Q9Y2F9 522 aa14.51□□□□□ -0.09
LIMS3-205ENST00000487150 DMXL1Q9Y485 3027 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 MROH6A6NGR9 719 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 LDB2O43679 373 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 SIGLEC6O43699 453 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 SRP72O76094 671 aaKnown RBP14.5□□□□□ -0.09
LIMS3-205ENST00000487150 MLNP12872 115 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 SLC2A4P14672 509 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 PPARGP37231 505 aaPredicted RBP14.5□□□□□ -0.09
LIMS3-205ENST00000487150 NPY2RP49146 381 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 VPS41P49754 854 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 DR1Q01658 176 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 MSLNQ13421 630 aaPredicted RBP14.5□□□□□ -0.09
LIMS3-205ENST00000487150 OLIG2Q13516 323 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 PTK6Q13882 451 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms