RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 PDE7BQ9NP56 450 aa9.54□□□□□ -0.88
PTPN7-213ENST00000486116 CPNE7Q9UBL6 633 aa9.54□□□□□ -0.88
PTPN7-213ENST00000486116 B4GALT6Q9UBX8 382 aa9.54□□□□□ -0.88
PTPN7-213ENST00000486116 CNOT8Q9UFF9 292 aaKnown RBP9.54□□□□□ -0.88
PTPN7-213ENST00000486116 RARRES3Q9UL19 164 aa9.54□□□□□ -0.88
PTPN7-213ENST00000486116 TCFL5Q9UL49 500 aa9.54□□□□□ -0.88
PTPN7-213ENST00000486116 STAP1Q9ULZ2 295 aa9.54□□□□□ -0.88
PTPN7-213ENST00000486116 SNX7Q9UNH6 387 aa9.54□□□□□ -0.88
PTPN7-213ENST00000486116 NOVA2Q9UNW9 492 aaKnown RBP9.54□□□□□ -0.88
PTPN7-213ENST00000486116 MTMR6Q9Y217 621 aa9.54□□□□□ -0.88
PTPN7-213ENST00000486116 SLC30A1Q9Y6M5 507 aa9.54□□□□□ -0.88
PTPN7-213ENST00000486116 GOLGA6CA6NDK9 693 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 GOLGA6BA6NDN3 693 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 SLC16A3O15427 465 aaKnown RBP9.53□□□□□ -0.88
PTPN7-213ENST00000486116 YEATS4O95619 227 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 SOD1P00441 154 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 GOLGA6DP0CG33 693 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 FOLR1P15328 257 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 NELFEP18615 380 aaKnown RBP9.53□□□□□ -0.88
PTPN7-213ENST00000486116 TEAD1P28347 426 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 ETV3P41162 512 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 KIR3DL1P43629 444 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 UBE2IP63279 158 aaKnown RBP9.53□□□□□ -0.88
PTPN7-213ENST00000486116 KCNAB1Q14722 419 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 MYBPC3Q14896 1274 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 SLC25A52Q3SY17 297 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 PTPN20Q4JDL3 420 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 RAB6CQ53S08 254 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 CACHD1Q5VU97 1274 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 RAET1GQ6H3X3 334 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 TRNP1Q6NT89 227 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 GALNT13Q8IUC8 556 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 TGIF2LYQ8IUE0 185 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 ZADH2Q8N4Q0 377 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 SLC38A9Q8NBW4 561 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 C1orf131Q8NDD1 294 aaKnown RBP9.53□□□□□ -0.88
PTPN7-213ENST00000486116 RSC1A1Q92681 617 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 DTD2Q96FN9 168 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 FCRL4Q96PJ5 515 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 TUBGCP5Q96RT8 1024 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 RAB6CQ9H0N0 254 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 GOLGA6AQ9NYA3 693 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 ZNHIT2Q9UHR6 403 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 PRKAB1Q9Y478 270 aa9.53□□□□□ -0.88
PTPN7-213ENST00000486116 A0A1W2PQJ5 194 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 KIAA1324LA8MWY0 1029 aaPredicted RBP9.52□□□□□ -0.89
PTPN7-213ENST00000486116 PMM2O15305 246 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 CPNE3O75131 537 aaKnown RBP9.52□□□□□ -0.89
PTPN7-213ENST00000486116 UBXN7O94888 489 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 ALPPP05187 535 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 CAPN1P07384 714 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 RAB40ALP0C0E4 278 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 F3P13726 295 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 KLK2P20151 261 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 TNFAIP3P21580 790 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 SERPINA4P29622 427 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 FLT3P36888 993 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 TSFMP43897 325 aaKnown RBP9.52□□□□□ -0.89
PTPN7-213ENST00000486116 KCNK10P57789 538 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 PDE1BQ01064 536 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 NRG1Q02297 640 aaPredicted RBP9.52□□□□□ -0.89
PTPN7-213ENST00000486116 Q0VFX4 171 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 CDSNQ15517 529 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 DENND2CQ68D51 928 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 CYB5D1Q6P9G0 228 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 CERS6Q6ZMG9 384 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 FAM92BQ6ZTR7 304 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 ZNF765Q7L2R6 523 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 HSD11B1LQ7Z5J1 315 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 SMYD4Q8IYR2 804 aaPredicted RBP9.52□□□□□ -0.89
PTPN7-213ENST00000486116 GALNT16Q8N428 558 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 CHTF18Q8WVB6 975 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 NSMCE3Q96MG7 304 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 WDR77Q9BQA1 342 aaPredicted RBP9.52□□□□□ -0.89
PTPN7-213ENST00000486116 HERPUD2Q9BSE4 406 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 GTPBP4Q9BZE4 634 aaKnown RBP9.52□□□□□ -0.89
PTPN7-213ENST00000486116 RETREG1Q9H6L5 497 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 ATP13A3Q9H7F0 1226 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 WASH6PQ9NQA3 447 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 DLL4Q9NR61 685 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 SUCOQ9UBS9 1254 aaKnown RBP9.52□□□□□ -0.89
PTPN7-213ENST00000486116 OR12D3Q9UGF7 316 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 PCDHA7Q9UN72 937 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 KCNK6Q9Y257 313 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 PCDHGB6Q9Y5F9 930 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 ANKRD12Q6UB98 2062 aa9.52□□□□□ -0.89
PTPN7-213ENST00000486116 SEC16AO15027 2179 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 ABCA4P78363 2273 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 IGHV5-51A0A0C4DH38 117 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 KIR2DS5A0A0G2JLQ3 304 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 A0A0G2JNG1 304 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 A0A0U1RQS6 177 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 KIR2DS3K7RE56 304 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 MASP2O00187 686 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 TRAFD1O14545 582 aaPredicted RBP9.51□□□□□ -0.89
PTPN7-213ENST00000486116 SNX2O60749 519 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 JRKO75564 520 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 SCRG1O75711 98 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 LRIG2O94898 1065 aa9.51□□□□□ -0.89
PTPN7-213ENST00000486116 HEXIM1O94992 359 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms