RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 TAF1AQ15573 450 aaPredicted RBP12.36□□□□□ -0.43
HMG20B-211ENST00000486028 KCTD16Q68DU8 428 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 KCTD11Q693B1 232 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 C4orf22Q6V702 233 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 NYAP1Q6ZVC0 841 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 GSTA5Q7RTV2 222 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 RAB44Q7Z6P3 723 aaPredicted RBP12.36□□□□□ -0.43
HMG20B-211ENST00000486028 TAF8Q7Z7C8 310 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 TRIM74Q86UV6 250 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 CHCHD4Q8N4Q1 142 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 TAB3Q8N5C8 712 aaPredicted RBP12.36□□□□□ -0.43
HMG20B-211ENST00000486028 BRSK1Q8TDC3 778 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 SCARF2Q96GP6 870 aaPredicted RBP12.36□□□□□ -0.43
HMG20B-211ENST00000486028 APOLD1Q96LR9 279 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 PLEKHG4BQ96PX9 1271 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 TMEM168Q9H0V1 697 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 SUDS3Q9H7L9 328 aaPredicted RBP12.36□□□□□ -0.43
HMG20B-211ENST00000486028 ARNT2Q9HBZ2 717 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 BPIFA1Q9NP55 256 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 TRNAU1APQ9NX07 287 aaKnown RBP12.36□□□□□ -0.43
HMG20B-211ENST00000486028 IL17CQ9P0M4 197 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 PAK5Q9P286 719 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 ANGPTL2Q9UKU9 493 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 TTC7AQ9ULT0 858 aaPredicted RBP12.36□□□□□ -0.43
HMG20B-211ENST00000486028 PYCARDQ9ULZ3 195 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 SUFUQ9UMX1 484 aa12.36□□□□□ -0.43
HMG20B-211ENST00000486028 COL5A1P20908 1838 aaPredicted RBP12.35□□□□□ -0.43
HMG20B-211ENST00000486028 E7EVH7 732 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 STX7O15400 261 aaKnown RBP12.35□□□□□ -0.43
HMG20B-211ENST00000486028 USP12O75317 370 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 RFPL3O75679 317 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 SLC25A14O95258 325 aaPredicted RBP12.35□□□□□ -0.43
HMG20B-211ENST00000486028 CRTAMO95727 393 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 AP2A1O95782 977 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 FUCA1P04066 466 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 ATP1A1P05023 1023 aaKnown RBP12.35□□□□□ -0.43
HMG20B-211ENST00000486028 CELA2BP08218 269 aaPredicted RBP12.35□□□□□ -0.43
HMG20B-211ENST00000486028 LPOP22079 712 aaPredicted RBP12.35□□□□□ -0.43
HMG20B-211ENST00000486028 LMAN1P49257 510 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 ACADVLP49748 655 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 SHC2P98077 582 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 PDE1BQ01064 536 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 E2F1Q01094 437 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 ILF3Q12906 894 aaKnown RBP eCLIP12.35□□□□□ -0.43
HMG20B-211ENST00000486028 OLIG2Q13516 323 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 PEX6Q13608 980 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 NR0B2Q15466 257 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 C6orf132Q5T0Z8 1188 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 DENND5AQ6IQ26 1287 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 LINC00523Q86TU6 105 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 RASGEF1CQ8N431 466 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 PDCD7Q8N8D1 485 aaKnown RBP12.35□□□□□ -0.43
HMG20B-211ENST00000486028 PRELID2Q8N945 189 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 FAM46DQ8NEK8 389 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 DTX3LQ8TDB6 740 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 GPBAR1Q8TDU6 330 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 GLYATL1Q969I3 302 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 POM121Q96HA1 1249 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 MS4A14Q96JA4 679 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 OSBPL9Q96SU4 736 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 BOCQ9BWV1 1114 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 GSDMCQ9BYG8 508 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 RMI1Q9H9A7 625 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 ETNK1Q9HBU6 452 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 IL26Q9NPH9 171 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 RAB6BQ9NRW1 208 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 VPS18Q9P253 973 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 GULP1Q9UBP9 304 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 SNX12Q9UMY4 172 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 GPR34Q9UPC5 381 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 GPSM3Q9Y4H4 160 aa12.35□□□□□ -0.43
HMG20B-211ENST00000486028 CEP295Q9C0D2 2601 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 USP27XA6NNY8 438 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 PGRMC1O00264 195 aaKnown RBP12.34□□□□□ -0.43
HMG20B-211ENST00000486028 CES2O00748 559 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 BUD23O43709 281 aaKnown RBP12.34□□□□□ -0.43
HMG20B-211ENST00000486028 HYAL3O43820 417 aaPredicted RBP12.34□□□□□ -0.43
HMG20B-211ENST00000486028 GAS8O95995 478 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 MYF5P13349 255 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 ETS1P14921 441 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 RPL22P35268 128 aaKnown RBP12.34□□□□□ -0.43
HMG20B-211ENST00000486028 SPAM1P38567 509 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 ADCY8P40145 1251 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 KCNJ1P48048 391 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 GNG11P61952 73 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 PYCR3Q53H96 274 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 DHRS13Q6UX07 377 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 MARK2Q7KZI7 788 aaKnown RBP12.34□□□□□ -0.43
HMG20B-211ENST00000486028 GALNT13Q8IUC8 556 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 PHYKPLQ8IUZ5 450 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 GALNT15Q8N3T1 639 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 MAGOHBQ96A72 148 aaKnown RBP12.34□□□□□ -0.43
HMG20B-211ENST00000486028 OR2M4Q96R27 311 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 TRIM39Q9HCM9 518 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 SIRPGQ9P1W8 387 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 ZNHIT2Q9UHR6 403 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 WASF3Q9UPY6 502 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 ARL5AQ9Y689 179 aa12.34□□□□□ -0.43
HMG20B-211ENST00000486028 OAS3Q9Y6K5 1087 aaKnown RBP12.34□□□□□ -0.43
HMG20B-211ENST00000486028 KNTC1P50748 2209 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms