RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SERAC1Q96JX3 654 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 MYOCQ99972 504 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 FUT8Q9BYC5 575 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 EPB41L4BQ9H329 900 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 IARS2Q9NSE4 1012 aaKnown RBP17.46■□□□□ 0.39
CHMP3-207ENST00000485465 MARCH4Q9P2E8 410 aaPredicted RBP17.46■□□□□ 0.39
CHMP3-207ENST00000485465 HS3ST3A1Q9Y663 406 aa17.46■□□□□ 0.39
CHMP3-207ENST00000485465 TRPM6Q9BX84 2022 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 TRBV5-4A0A0C4DH59 114 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 AGAP14A8MT82 685 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 FPGTO14772 594 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 GPR39O43194 453 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 LILRB5O75023 590 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 ABHD2P08910 425 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 CA5AP35218 305 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 UAP1Q16222 522 aaPredicted RBP17.45■□□□□ 0.38
CHMP3-207ENST00000485465 PLK5Q496M5 336 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 PMS2CLQ68D20 193 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 MRNIPQ6NTE8 343 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 PSAPL1Q6NUJ1 521 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 CEP68Q76N32 757 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 TAS2R42Q7RTR8 314 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 LMNTD2Q8IXW0 634 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 PIANPQ8IYJ0 282 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 MREGQ8N565 214 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 TMEM145Q8NBT3 493 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 CALML6Q8TD86 181 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 BTN2A2Q8WVV5 523 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 UBLCP1Q8WVY7 318 aaPredicted RBP17.45■□□□□ 0.38
CHMP3-207ENST00000485465 DNASE2BQ8WZ79 361 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.45■□□□□ 0.38
CHMP3-207ENST00000485465 ULK4Q96C45 1275 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 ZC3H10Q96K80 434 aaKnown RBP17.45■□□□□ 0.38
CHMP3-207ENST00000485465 VPS35Q96QK1 796 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 FAM167BQ9BTA0 163 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 SMOXQ9NWM0 555 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 EIF2B4Q9UI10 523 aaKnown RBP17.45■□□□□ 0.38
CHMP3-207ENST00000485465 RABGEF1Q9UJ41 708 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 CRLS1Q9UJA2 301 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 TMPRSS11EQ9UL52 423 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 CNOT6Q9ULM6 557 aaKnown RBP17.45■□□□□ 0.38
CHMP3-207ENST00000485465 CA5BQ9Y2D0 317 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 PLXNA2O75051 1894 aa17.45■□□□□ 0.38
CHMP3-207ENST00000485465 ZNF106Q9H2Y7 1883 aaKnown RBP17.45■□□□□ 0.38
CHMP3-207ENST00000485465 A0A087WUV0 522 aaPredicted RBP17.44■□□□□ 0.38
CHMP3-207ENST00000485465 FAM159BA6NKW6 160 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 RHOBTB1O94844 696 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 C1QAP02745 245 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 TRIM23P36406 574 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 HSD17B3P37058 310 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 PTGER3P43115 390 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 CLDN2P57739 230 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 SLC29A2Q14542 456 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 SEMA3AQ14563 771 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 WDR45BQ5MNZ6 344 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 BEND6Q5SZJ8 279 aaPredicted RBP17.44■□□□□ 0.38
CHMP3-207ENST00000485465 TEDDM1Q5T9Z0 273 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 LYPLAL1Q5VWZ2 237 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 GCNT7Q6ZNI0 430 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 ARMCX6Q7L4S7 300 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 SDCCAG8Q86SQ7 713 aaPredicted RBP17.44■□□□□ 0.38
CHMP3-207ENST00000485465 SERPINA9Q86WD7 417 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 CNTN4Q8IWV2 1026 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 NXPE1Q8N323 547 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 OTUD6BQ8N6M0 293 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 GABPB2Q8TAK5 448 aaPredicted RBP17.44■□□□□ 0.38
CHMP3-207ENST00000485465 UHMK1Q8TAS1 419 aaKnown RBP17.44■□□□□ 0.38
CHMP3-207ENST00000485465 GLYATL1Q969I3 302 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 BMFQ96LC9 184 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 TEX101Q9BY14 249 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 SMYD2Q9NRG4 433 aa17.44■□□□□ 0.38
CHMP3-207ENST00000485465 POM121BA6NF01 834 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 CXorf49A8MYA2 514 aaPredicted RBP17.43■□□□□ 0.38
CHMP3-207ENST00000485465 INPP4BO15327 924 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 H2AFXP16104 143 aaPredicted RBP17.43■□□□□ 0.38
CHMP3-207ENST00000485465 OGNP20774 298 aaKnown RBP17.43■□□□□ 0.38
CHMP3-207ENST00000485465 ACRV1P26436 265 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 MAOBP27338 520 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 DHPSP49366 369 aaPredicted RBP17.43■□□□□ 0.38
CHMP3-207ENST00000485465 SIM2Q14190 667 aaPredicted RBP17.43■□□□□ 0.38
CHMP3-207ENST00000485465 STAT4Q14765 748 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 KBTBD12Q3ZCT8 623 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 AARS2Q5JTZ9 985 aaKnown RBP17.43■□□□□ 0.38
CHMP3-207ENST00000485465 LYSMD4Q5XG99 296 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 ZNF470Q6ECI4 717 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 CERS6Q6ZMG9 384 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 KDM7AQ6ZMT4 941 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 LDB1Q86U70 411 aaPredicted RBP17.43■□□□□ 0.38
CHMP3-207ENST00000485465 HEATR4Q86WZ0 1026 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 CILP2Q8IUL8 1156 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 DENND6AQ8IWF6 608 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 RGL4Q8IZJ4 473 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 PNPLA1Q8N8W4 532 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 CDKL2Q92772 493 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 HIC2Q96JB3 615 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 SLC6A18Q96N87 628 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 APOOQ9BUR5 198 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 MIR1-1HGQ9H1L0 117 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 ACSS3Q9H6R3 686 aa17.43■□□□□ 0.38
CHMP3-207ENST00000485465 WDR26Q9H7D7 661 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms