RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 LIMK2P53671 638 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 AP3M2P53677 418 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 PMS2P54278 862 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 YPEL5P62699 121 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 HMGN5P82970 282 aaKnown RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 B4GALNT1Q00973 533 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 ABHD18Q0P651 414 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 HLTFQ14527 1009 aaKnown RBP eCLIP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 C14orf28Q4W4Y0 310 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 RRAGBQ5VZM2 374 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 JMJD6Q6NYC1 403 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 MSANTD2Q6P1R3 559 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 ENPP7Q6UWV6 458 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 GDF7Q7Z4P5 450 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 NELFCDQ8IXH7 590 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 CCAR2Q8N163 923 aaKnown RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 Q8NA96 180 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 ANKRD52Q8NB46 1076 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 ATP11CQ8NB49 1132 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 TP53I13Q8NBR0 393 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 DENND6BQ8NEG7 585 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 FAM46DQ8NEK8 389 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 OR52K2Q8NGK3 314 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 PARD3BQ8TEW8 1205 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 KCTD13Q8WZ19 329 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 TAF4BQ92750 862 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 RTP4Q96DX8 246 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 RNF31Q96EP0 1072 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 PPP1R16AQ96I34 528 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 CCDC114Q96M63 670 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 PWWP2AQ96N64 755 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 LLPHQ9BRT6 129 aaKnown RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 SPRY4Q9C004 299 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 DNAI2Q9GZS0 605 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 DPEP2Q9H4A9 486 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 ZCCHC4Q9H5U6 513 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 CYP3A43Q9HB55 503 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 APOBEC3GQ9HC16 384 aaKnown RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 MRPL40Q9NQ50 206 aaKnown RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 MBNL1Q9NR56 388 aaKnown RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 RCOR3Q9P2K3 495 aaPredicted RBP5.37□□□□□ -1.55
PTPN4-210ENST00000485247 IL36AQ9UHA7 158 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 VPS28Q9UK41 221 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 ITM2BQ9Y287 266 aa5.37□□□□□ -1.55
PTPN4-210ENST00000485247 C7orf72A4D263 438 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 A6NCN8 305 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 RHPN2P1A8MT19 583 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 F5H5T6 163 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 XPO1O14980 1071 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 INPP4BO15327 924 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 SMAD6O43541 496 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 NUDT21O43809 227 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 SNAP91O60641 907 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 EIF5BO60841 1220 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 ZG16O60844 167 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 STK17BO94768 372 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 RASGRP1O95267 797 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 HLA-DRAP01903 254 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 RRM1P23921 792 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 CD1CP29017 333 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 DLSTP36957 453 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 ETFBP38117 255 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 ZNF143P52747 638 aaPredicted RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 MAZP56270 477 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 DAOAP59103 153 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 RNASE9P60153 205 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 SRP54P61011 504 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 SEMA5AQ13591 1074 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 TRA2AQ13595 282 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 ZRSR2Q15696 482 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 GOLGA7BQ2TAP0 167 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 ZACNQ401N2 412 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 NKAIN2Q5VXU1 208 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 KCTD16Q68DU8 428 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 ARHGAP17Q68EM7 881 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 GTF2IRD2BQ6EKJ0 949 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 MRM1Q6IN84 353 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 CXorf57Q6NSI4 855 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 LINGO4Q6UY18 593 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 DPY19L3Q6ZPD9 716 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 PARS2Q7L3T8 475 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 TAF8Q7Z7C8 310 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 GTF2IRD2Q86UP8 949 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 TRIM59Q8IWR1 403 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 CCDC65Q8IXS2 484 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 LZTR1Q8N653 840 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 BMPERQ8N8U9 685 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 SNRNP40Q96DI7 357 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 ALG14Q96F25 216 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 TEFMQ96QE5 360 aaKnown RBP5.36□□□□□ -1.55
PTPN4-210ENST00000485247 RANBP9Q96S59 729 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 PPP1R9BQ96SB3 815 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 FEM1AQ9BSK4 669 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 SLC25A23Q9BV35 468 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 PANK2Q9BZ23 570 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 IMPG2Q9BZV3 1241 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 CNGB3Q9NQW8 809 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 ASF1BQ9NVP2 202 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 ACTR10Q9NZ32 417 aa5.36□□□□□ -1.55
PTPN4-210ENST00000485247 TMEM9Q9P0T7 183 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms