RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SEPT11Q9NVA2 429 aaKnown RBP12.76□□□□□ -0.37
UBR4-213ENST00000483922 DONSONQ9NYP3 566 aa12.76□□□□□ -0.37
UBR4-213ENST00000483922 FADS2P1A8MWK0 482 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 KIF1CO43896 1103 aaKnown RBP12.75□□□□□ -0.37
UBR4-213ENST00000483922 LRCH4O75427 683 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 CLDN7O95471 211 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 PRLP01236 227 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 PSMA2P25787 234 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 COL8A1P27658 744 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 MAPK9P45984 424 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 LEPRP48357 1165 aaKnown RBP12.75□□□□□ -0.37
UBR4-213ENST00000483922 STC1P52823 247 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 UBE2IP63279 158 aaKnown RBP12.75□□□□□ -0.37
UBR4-213ENST00000483922 MC1RQ01726 317 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 MN1Q10571 1320 aaPredicted RBP12.75□□□□□ -0.37
UBR4-213ENST00000483922 PEX6Q13608 980 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 LRP8Q14114 963 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 SEPT6Q14141 434 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 ZNF648Q5T619 568 aaPredicted RBP12.75□□□□□ -0.37
UBR4-213ENST00000483922 TXNRD3NBQ6F5E7 133 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 ATCAYQ86WG3 371 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 ESX1Q8N693 406 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 TNRC6AQ8NDV7 1962 aaKnown RBP12.75□□□□□ -0.37
UBR4-213ENST00000483922 EXD1Q8NHP7 514 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 C9orf72Q96LT7 481 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 PLEKHG4BQ96PX9 1271 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 PRDM8Q9NQV8 689 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 DTLQ9NZJ0 730 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 CPNE7Q9UBL6 633 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 SLC23A2Q9UGH3 650 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 ADGRG1Q9Y653 693 aa12.75□□□□□ -0.37
UBR4-213ENST00000483922 A0A0J9YYE9 177 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 GOLGA6L3A6NEY3 463 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 TMCO5BA8MYB1 307 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 EIF3CLB5ME19 914 aaKnown RBP12.74□□□□□ -0.37
UBR4-213ENST00000483922 SNX2O60749 519 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 KATNA1O75449 491 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 TIAF1O95411 115 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 ASMTLO95671 621 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 TRBC1P01850 177 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 ANKRD34CP0C6C1 535 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 PPM1FP49593 454 aaPredicted RBP12.74□□□□□ -0.37
UBR4-213ENST00000483922 EPHA4P54764 986 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 FOXM1Q08050 763 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 ZNF235Q14590 738 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 NADK2Q4G0N4 442 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 FAM182AQ5T1J6 154 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 ARMC12Q5T9G4 340 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 C6orf15Q6UXA7 325 aaPredicted RBP12.74□□□□□ -0.37
UBR4-213ENST00000483922 ZNF765Q7L2R6 523 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 APTXQ7Z2E3 356 aaKnown RBP12.74□□□□□ -0.37
UBR4-213ENST00000483922 POLNQ7Z5Q5 900 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 LZTR1Q8N653 840 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 TEX26Q8N6G2 289 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 ENOX1Q8TC92 643 aaKnown RBP12.74□□□□□ -0.37
UBR4-213ENST00000483922 EID2BQ96D98 161 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 ELMO2Q96JJ3 720 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 EIF3CQ99613 913 aaKnown RBP12.74□□□□□ -0.37
UBR4-213ENST00000483922 ULBP3Q9BZM4 244 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 ZNF624Q9P2J8 865 aaPredicted RBP12.74□□□□□ -0.37
UBR4-213ENST00000483922 MAP4K5Q9Y4K4 846 aa12.74□□□□□ -0.37
UBR4-213ENST00000483922 CDC14CA4D256 554 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 ANKRD62A6NC57 917 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 MKRN2OSH3BPM6 223 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 CREG1O75629 220 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 KIAA0754O94854 1291 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 AGFG2O95081 481 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 ACP5P13686 325 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 F3P13726 295 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 TYRP1P17643 537 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 IL4RP24394 825 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 SLC19A1P41440 591 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 SEPHS1P49903 392 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 PMS2P54278 862 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 LAMB3Q13751 1172 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 FHL5Q5TD97 284 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 ZNF787Q6DD87 383 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 LYSMD3Q7Z3D4 306 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 APLFQ8IW19 511 aaPredicted RBP12.73□□□□□ -0.37
UBR4-213ENST00000483922 GALNT11Q8NCW6 608 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 OR6C1Q96RD1 312 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 ZMYND15Q9H091 742 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 ARFGAP3Q9NP61 516 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 NT5MQ9NPB1 228 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 PARVAQ9NVD7 372 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 FANCLQ9NW38 375 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 CHKBQ9Y259 395 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 PCDHGA6Q9Y5G7 932 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 SHANK1Q9Y566 2161 aa12.73□□□□□ -0.37
UBR4-213ENST00000483922 CREBBPQ92793 2442 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 A1L4Q6 167 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 TTLL8A6PVC2 850 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 SPAG6O75602 509 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 FGF5P12034 268 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 BRAFP15056 766 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 ZNF8P17098 575 aaPredicted RBP12.72□□□□□ -0.37
UBR4-213ENST00000483922 XRCC1P18887 633 aaPredicted RBP12.72□□□□□ -0.37
UBR4-213ENST00000483922 HSPA9P38646 679 aaKnown RBP12.72□□□□□ -0.37
UBR4-213ENST00000483922 MMP13P45452 471 aa12.72□□□□□ -0.37
UBR4-213ENST00000483922 COPB1P53618 953 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms