RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SLC35G2Q8TBE7 412 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 HTR3CQ8WXA8 447 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 HDAC11Q96DB2 347 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 SGF29Q96ES7 293 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 LYSMD1Q96S90 227 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 CDH19Q9H159 772 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 KCNK4Q9NYG8 393 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 AMACRQ9UHK6 382 aa17.87■□□□□ 0.45
ATG4B-221ENST00000483778 MYO18BQ8IUG5 2567 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 KRT7P08729 469 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 BIRC2Q13490 618 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 GALNT3Q14435 633 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 MANEAQ5SRI9 462 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-221ENST00000483778 LYSMD3Q7Z3D4 306 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 GALNT13Q8IUC8 556 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 SFRP1Q8N474 314 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 OR4D9Q8NGE8 314 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 CTNNBL1Q8WYA6 563 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-221ENST00000483778 ART4Q93070 314 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 FAM83DQ9H4H8 585 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 KCNK6Q9Y257 313 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 HYOU1Q9Y4L1 999 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 PCDHGA4Q9Y5G9 962 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 HEY1Q9Y5J3 304 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 B3GALT1Q9Y5Z6 326 aa17.86■□□□□ 0.45
ATG4B-221ENST00000483778 A8MU76 341 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 J3QKU1 62 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 THRAP10827 490 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 RPL26P61254 145 aaKnown RBP17.85■□□□□ 0.45
ATG4B-221ENST00000483778 PPIDQ08752 370 aaKnown RBP17.85■□□□□ 0.45
ATG4B-221ENST00000483778 ZFYVE27Q5T4F4 411 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 IYDQ6PHW0 289 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 MAP7D3Q8IWC1 876 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 OR8K1Q8NGG5 319 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 NKD1Q969G9 470 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 IQCDQ96DY2 449 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 TAAR9Q96RI9 348 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 TRIB3Q96RU7 358 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 DNAJC7Q99615 494 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 MLPHQ9BV36 600 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-221ENST00000483778 SPTLC3Q9NUV7 552 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 ATXN10Q9UBB4 475 aa17.85■□□□□ 0.45
ATG4B-221ENST00000483778 RPL26L1Q9UNX3 145 aaKnown RBP17.85■□□□□ 0.45
ATG4B-221ENST00000483778 LRRD1A4D1F6 860 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 A6NCN8 305 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 HGSO14964 777 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-221ENST00000483778 TMEM253P0C7T8 217 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 FAM87AP0C7U9 286 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 ACP5P13686 325 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 MX2P20592 715 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 MAN1A1P33908 653 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 FASLGP48023 281 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 IFI35P80217 286 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-221ENST00000483778 NFKB2Q00653 900 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 NFATC2Q13469 925 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 TBR1Q16650 682 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 SNAP47Q5SQN1 464 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 SLC9A4Q6AI14 798 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 TMEM71Q6P5X7 295 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 GPR26Q8NDV2 337 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 AGAP3Q96P47 875 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 SEPT10Q9P0V9 454 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 PDP2Q9P2J9 529 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 SLC23A2Q9UGH3 650 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 SHOC2Q9UQ13 582 aa17.84■□□□□ 0.45
ATG4B-221ENST00000483778 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.84■□□□□ 0.453e-7■■□□□ 13.1
ATG4B-221ENST00000483778 ZNF106Q9H2Y7 1883 aaKnown RBP17.84■□□□□ 0.45
ATG4B-221ENST00000483778 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-221ENST00000483778 SNX2O60749 519 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 ZNF8P17098 575 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-221ENST00000483778 ITGB6P18564 788 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 NOP2P46087 812 aaKnown RBP17.83■□□□□ 0.44
ATG4B-221ENST00000483778 AP1B1Q10567 949 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 TRA2AQ13595 282 aaKnown RBP eCLIP17.83■□□□□ 0.44
ATG4B-221ENST00000483778 LLGL1Q15334 1064 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 CLPPQ16740 277 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-221ENST00000483778 ALS2CLQ60I27 953 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 BMPERQ8N8U9 685 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 SPATA22Q8NHS9 363 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 RNF25Q96BH1 459 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-221ENST00000483778 TADA1Q96BN2 335 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 IMP4Q96G21 291 aaKnown RBP17.83■□□□□ 0.44
ATG4B-221ENST00000483778 SLC38A3Q99624 504 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 SLC12A9Q9BXP2 914 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 B3GNT4Q9C0J1 378 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 PRDM8Q9NQV8 689 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 SLC39A1Q9NY26 324 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 VPS18Q9P253 973 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 SAE1Q9UBE0 346 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-221ENST00000483778 TMPRSS11EQ9UL52 423 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 ADGRG1Q9Y653 693 aa17.83■□□□□ 0.44
ATG4B-221ENST00000483778 EFCAB7A8K855 629 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 AURKAO14965 403 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 PYGLP06737 847 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 TNNT1P13805 278 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 UGT1A3P35503 534 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 HHEXQ03014 270 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 NFATC3Q12968 1075 aa17.82■□□□□ 0.44
ATG4B-221ENST00000483778 LRP8Q14114 963 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms