RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 RYBPQ8N488 228 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-225ENST00000483495 STAG3L4Q8TBR4 150 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 CD200R1Q8TD46 325 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 SCRN2Q96FV2 425 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 LBHD1Q9BQE6 289 aaPredicted RBP13.16□□□□□ -0.3
CPNE1-225ENST00000483495 NUF2Q9BZD4 464 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 IL26Q9NPH9 171 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 BAIAP2L1Q9UHR4 511 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 FBXO10Q9UK96 956 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 CDYLQ9Y232 598 aa13.16□□□□□ -0.3
CPNE1-225ENST00000483495 A0A1W2PQ67 120 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 TRPC5OSA6NMA1 111 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 GRXCR1A8MXD5 290 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 PRMT5O14744 637 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-225ENST00000483495 NIPSNAP2O75323 286 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 PRAMEF1O95521 474 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 BPIP17213 487 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 PPARGP37231 505 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-225ENST00000483495 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-225ENST00000483495 MNAT1P51948 309 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 SATB1Q01826 763 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 KDSRQ06136 332 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 NFATC2Q13469 925 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 GPM6BQ13491 265 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 LYPLAL1Q5VWZ2 237 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 DPY19L3Q6ZPD9 716 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 TPRG1Q6ZUI0 275 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 ACAD11Q709F0 780 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 CUZD1Q86UP6 607 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 AHI1Q8N157 1196 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 CPSF7Q8N684 471 aaKnown RBP13.15□□□□□ -0.3
CPNE1-225ENST00000483495 RBM15BQ8NDT2 890 aaKnown RBP13.15□□□□□ -0.3
CPNE1-225ENST00000483495 GIMAP7Q8NHV1 300 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 FAM136AQ96C01 138 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 SLC30A3Q99726 388 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 SHCBP1LQ9BZQ2 653 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 ZNF385DQ9H6B1 395 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 WDR55Q9H6Y2 383 aaPredicted RBP13.15□□□□□ -0.3
CPNE1-225ENST00000483495 GALPQ9UBC7 116 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 SLCO3A1Q9UIG8 710 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 TRMT6Q9UJA5 497 aaKnown RBP13.15□□□□□ -0.3
CPNE1-225ENST00000483495 PLA2G4CQ9UP65 541 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 MRPS23Q9Y3D9 190 aaKnown RBP13.15□□□□□ -0.3
CPNE1-225ENST00000483495 WNT6Q9Y6F9 365 aa13.15□□□□□ -0.3
CPNE1-225ENST00000483495 NPIPB15A6NHN6 443 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 AGAP14A8MT82 685 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 E9PBE3 544 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 UBXN8O00124 270 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 SLC22A2O15244 555 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 GPR39O43194 453 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 KLK8O60259 260 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 KLHL41O60662 606 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 MAGEC1O60732 1142 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 JUNP05412 331 aaKnown RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 NCF2P19878 526 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ITGALP20701 1170 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 EPHA3P29320 983 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ADSLP30566 484 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 CPA2P48052 419 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 CLCN7P51798 805 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 NAA25Q14CX7 972 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 DNAL1Q4LDG9 190 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 WASHC2DQ5SRD0 308 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 TMEM215Q68D42 235 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 GRAMD4Q6IC98 578 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 FAM109BQ6ICB4 259 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 UGT3A1Q6NUS8 523 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 CRTC1Q6UUV9 634 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 FAM151BQ6UXP7 276 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 SERPINA9Q86WD7 417 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 PHTF2Q8N3S3 785 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 CELF5Q8N6W0 485 aaKnown RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 PTGR2Q8N8N7 351 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ING5Q8WYH8 240 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 CMTM5Q96DZ9 223 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 PDLIM5Q96HC4 596 aaKnown RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ASB2Q96Q27 587 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 TTC1Q99614 292 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 OSBPL1AQ9BXW6 950 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 IKZF3Q9UKT9 509 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 FNDC3AQ9Y2H6 1198 aaKnown RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 GLYATL1P3A0A0U1RQE8 302 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 SYCE1LA8MT33 242 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 TMEM233B4DJY2 109 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 SDHDO14521 159 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 UBFD1O14562 309 aaKnown RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 DCXO43602 365 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ZNF7P17097 686 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 CPOXP36551 454 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 SPAM1P38567 509 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 INHBCP55103 352 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 IL2P60568 153 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 KLF10Q13118 480 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 CBX2Q14781 532 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 GPR33Q49SQ1 333 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ACCSLQ4AC99 568 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 USP45Q70EL2 814 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 RAB44Q7Z6P3 723 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-225ENST00000483495 ADGRD2Q7Z7M1 963 aa13.14□□□□□ -0.31
CPNE1-225ENST00000483495 TSPAN33Q86UF1 283 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms