RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SCAMP1O15126 338 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 MTX2O75431 263 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 SLU7O95391 586 aaKnown RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 NXPH1P58417 271 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 PRAMEP78395 509 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 PDIA2Q13087 525 aaKnown RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 HLTFQ14527 1009 aaKnown RBP eCLIP17.71■□□□□ 0.435e-8■■□□□ 14.2
CPNE1-224ENST00000483359 FASTKD3Q14CZ7 662 aaKnown RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 ZRANB3Q5FWF4 1079 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 ZNF648Q5T619 568 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 ADAMTSL4Q6UY14 1074 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 NLRP9Q7RTR0 991 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 CCDC25Q86WR0 208 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 ANKMY2Q8IV38 441 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 GDAP1Q8TB36 358 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 SEC14L1Q92503 715 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 WDR83Q9BRX9 315 aaKnown RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 TEX101Q9BY14 249 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 FRMD8Q9BZ67 464 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 PARD6AQ9NPB6 346 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 PHPT1Q9NRX4 125 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-224ENST00000483359 TREX1Q9NSU2 369 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 MOSPD1Q9UJG1 213 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 APPL1Q9UKG1 709 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 RPS6KL1Q9Y6S9 549 aa17.71■□□□□ 0.43
CPNE1-224ENST00000483359 CCDC162PA2VCL2 907 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 TMEM202A6NGA9 273 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 MYCLP1P12525 358 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 ELK3P41970 407 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 CDKN1CP49918 316 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 DRG2P55039 364 aaKnown RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 YPEL5P62699 121 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 OVGP1Q12889 678 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 NFATC4Q14934 902 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 KCTD16Q68DU8 428 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 ENPP7Q6UWV6 458 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 NLRP8Q86W28 1048 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 IGDCC3Q8IVU1 814 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 PNPLA1Q8N8W4 532 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 OR6P1Q8NGX9 317 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 PTCD2Q8WV60 388 aaKnown RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 HIC2Q96JB3 615 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 GDF3Q9NR23 364 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 FAM114A2Q9NRY5 505 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 GPR27Q9NS67 375 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 TMEM98Q9Y2Y6 226 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 SLC30A1Q9Y6M5 507 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 PCDH15Q96QU1 1955 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 LNP1A1A4G5 178 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 GOLGA8KD6RF30 607 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 GOLGA8TH3BQL2 631 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 SLC25A14O95258 325 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 GOT2P00505 430 aaKnown RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 PYGLP06737 847 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 ENGP17813 658 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 HTR1BP28222 390 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 CAV1Q03135 178 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 NFATC2Q13469 925 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 ITGA9Q13797 1035 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 TCEA2Q15560 299 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 ZBED8Q8IZ13 594 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 ZNF398Q8TD17 642 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 GLYATL1Q969I3 302 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 CFAP36Q96G28 342 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 MRM3Q9HC36 420 aaKnown RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 MRPL40Q9NQ50 206 aaKnown RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 CRLS1Q9UJA2 301 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 TMPRSS11EQ9UL52 423 aa17.7■□□□□ 0.42
CPNE1-224ENST00000483359 CNOT6Q9ULM6 557 aaKnown RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 PNMA8BQ9ULN7 279 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 OAS3Q9Y6K5 1087 aaKnown RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 V9GYY5 206 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-224ENST00000483359 CACNA1EQ15878 2313 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 SPTY2D1-AS1A0A0U1RR47 76 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 MAGEC1O60732 1142 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 ASMTLO95671 621 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 ZNF806P0C7X5 589 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 ITGALP20701 1170 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 CTSKP43235 329 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 POLD2P49005 469 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 CARSP49589 748 aaKnown RBP17.69■□□□□ 0.42
CPNE1-224ENST00000483359 KIAA1024LP59773 190 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 IL9RQ01113 521 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 FZD2Q14332 565 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 PSAPL1Q6NUJ1 521 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 MACC1Q6ZN28 852 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 CENPUQ71F23 418 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 MARK2Q7KZI7 788 aaKnown RBP17.69■□□□□ 0.42
CPNE1-224ENST00000483359 RD3Q7Z3Z2 195 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 PARGQ86W56 976 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 PHYKPLQ8IUZ5 450 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 FAM174AQ8TBP5 190 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 NAT14Q8WUY8 206 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 PDXPQ96GD0 296 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 FCRL3Q96P31 734 aaPredicted RBP17.69■□□□□ 0.42
CPNE1-224ENST00000483359 FGF22Q9HCT0 170 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 RRAGDQ9NQL2 400 aaPredicted RBP17.69■□□□□ 0.42
CPNE1-224ENST00000483359 RXFP3Q9NSD7 469 aa17.69■□□□□ 0.42
CPNE1-224ENST00000483359 ZDHHC18Q9NUE0 388 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms