RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ZC3H7BQ9UGR2 993 aaKnown RBP13.15□□□□□ -0.3
HDAC1-208ENST00000482310 CRLS1Q9UJA2 301 aa13.15□□□□□ -0.3
HDAC1-208ENST00000482310 GMEB2Q9UKD1 530 aa13.15□□□□□ -0.3
HDAC1-208ENST00000482310 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.15□□□□□ -0.3
HDAC1-208ENST00000482310 SLC30A1Q9Y6M5 507 aa13.15□□□□□ -0.3
HDAC1-208ENST00000482310 A0A1B0GTW7 788 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 SRP72O76094 671 aaKnown RBP13.14□□□□□ -0.31
HDAC1-208ENST00000482310 VAPBO95292 243 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 ASMTLO95671 621 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 MYBL2P10244 700 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 PGAM1P18669 254 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 ITGALP20701 1170 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 ECHS1P30084 290 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 NUDT1P36639 197 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 AFF3P51826 1226 aaKnown RBP13.14□□□□□ -0.31
HDAC1-208ENST00000482310 THOP1P52888 689 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 DCDC1P59894 354 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 RACK1P63244 317 aaKnown RBP13.14□□□□□ -0.31
HDAC1-208ENST00000482310 CDK3Q00526 305 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 CUL1Q13616 776 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 AGERQ15109 404 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 TEAD4Q15561 434 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 ANKRD20A4Q4UJ75 823 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 ZNF542PQ5EBM4 170 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 LAIR1Q6GTX8 287 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 PSAPL1Q6NUJ1 521 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 AFTPHQ6ULP2 937 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 KYAT3Q6YP21 454 aaKnown RBP13.14□□□□□ -0.31
HDAC1-208ENST00000482310 MARK2Q7KZI7 788 aaKnown RBP13.14□□□□□ -0.31
HDAC1-208ENST00000482310 ZNF765Q7L2R6 523 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 NLRP9Q7RTR0 991 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 LDB1Q86U70 411 aaPredicted RBP13.14□□□□□ -0.31
HDAC1-208ENST00000482310 SLC22A18ASQ8N1D0 253 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 TRAM1L1Q8N609 369 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 SUMF1Q8NBK3 374 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 ZNF398Q8TD17 642 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 PYROXD1Q8WU10 500 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 ASB12Q8WXK4 309 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 FUBP1Q96AE4 644 aaKnown RBP13.14□□□□□ -0.31
HDAC1-208ENST00000482310 KLHDC7BQ96G42 594 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 EBNA1BP2Q99848 306 aaKnown RBP13.14□□□□□ -0.31
HDAC1-208ENST00000482310 ZSCAN5AQ9BUG6 496 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 APOOQ9BUR5 198 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 MRM3Q9HC36 420 aaKnown RBP13.14□□□□□ -0.31
HDAC1-208ENST00000482310 PPANQ9NQ55 473 aaKnown RBP13.14□□□□□ -0.31
HDAC1-208ENST00000482310 PHPT1Q9NRX4 125 aaPredicted RBP13.14□□□□□ -0.31
HDAC1-208ENST00000482310 TREX1Q9NSU2 369 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 NCDNQ9UBB6 729 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 APPL1Q9UKG1 709 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 TMEM98Q9Y2Y6 226 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 TEX264Q9Y6I9 313 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 DMXL1Q9Y485 3027 aa13.14□□□□□ -0.31
HDAC1-208ENST00000482310 FAM237BA0A1B0GVD1 139 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 A0A1W2PR77 199 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 RGSL1A5PLK6 1076 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 CACNB4O00305 520 aaPredicted RBP13.13□□□□□ -0.31
HDAC1-208ENST00000482310 SLC25A14O95258 325 aaPredicted RBP13.13□□□□□ -0.31
HDAC1-208ENST00000482310 POLBP06746 335 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 PAMP19021 973 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 AKT1P31749 480 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 MAGEA4P43358 317 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 RABIFP47224 123 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 POLD2P49005 469 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 VSNL1P62760 191 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 XIAPP98170 497 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 DPTQ07507 201 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 SPEM2Q0P670 501 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 CRYMQ14894 314 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 TRIM61Q5EBN2 209 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 PRAMEF14Q5SWL7 426 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 ZDHHC20Q5W0Z9 365 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 UNC5AQ6ZN44 842 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 DET1Q7L5Y6 550 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 RD3Q7Z3Z2 195 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 ABI3BPQ7Z7G0 1075 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 PALM2Q8IXS6 379 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
HDAC1-208ENST00000482310 C1orf216Q8TAB5 229 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 PTCD2Q8WV60 388 aaKnown RBP13.13□□□□□ -0.31
HDAC1-208ENST00000482310 CCDC97Q96F63 343 aaPredicted RBP13.13□□□□□ -0.31
HDAC1-208ENST00000482310 HIC2Q96JB3 615 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 MRPL40Q9NQ50 206 aaKnown RBP13.13□□□□□ -0.31
HDAC1-208ENST00000482310 CATSPERZQ9NTU4 200 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 C20orf96Q9NUD7 363 aaPredicted RBP13.13□□□□□ -0.31
HDAC1-208ENST00000482310 KCTD5Q9NXV2 234 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 SLC17A6Q9P2U8 582 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 SUSD2Q9UGT4 822 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 HS3ST3A1Q9Y663 406 aa13.13□□□□□ -0.31
HDAC1-208ENST00000482310 OAS3Q9Y6K5 1087 aaKnown RBP13.13□□□□□ -0.31
HDAC1-208ENST00000482310 E7ESA3 106 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 TLR4O00206 839 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 USP1O94782 785 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 LMNAP02545 664 aaKnown RBP13.12□□□□□ -0.31
HDAC1-208ENST00000482310 FAM153BP0C7A2 387 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 ERVK-10P10266 1014 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 MYCLP1P12525 358 aaPredicted RBP13.12□□□□□ -0.31
HDAC1-208ENST00000482310 SSTR1P30872 391 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 FOXN2P32314 431 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 PFN3P60673 137 aa13.12□□□□□ -0.31
HDAC1-208ENST00000482310 IL9RQ01113 521 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms