RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ITGA2BP08514 1039 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 PIRTP0C851 137 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 SLC2A4P14672 509 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 CCKBRP32239 447 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 ATP5OP48047 213 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 PPP2R5EQ16537 467 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 HENMT1Q5T8I9 393 aaKnown RBP19.74■□□□□ 0.75
MSH5-215ENST00000482280 CHST15Q7LFX5 561 aaPredicted RBP19.74■□□□□ 0.75
MSH5-215ENST00000482280 SPACA3Q8IXA5 215 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 HTR3CQ8WXA8 447 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 SCARF2Q96GP6 870 aaPredicted RBP19.74■□□□□ 0.75
MSH5-215ENST00000482280 HEMGNQ9BXL5 484 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 FSD1LQ9BXM9 530 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 DPH1Q9BZG8 443 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 ASCL3Q9NQ33 180 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 UBP1Q9NZI7 540 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 TRHDEQ9UKU6 1024 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 ATXN7L1Q9ULK2 861 aaPredicted RBP19.74■□□□□ 0.75
MSH5-215ENST00000482280 PKD1L2Q7Z442 2459 aa19.74■□□□□ 0.75
MSH5-215ENST00000482280 ANKRD11Q6UB99 2663 aaPredicted RBP19.73■□□□□ 0.75
MSH5-215ENST00000482280 ADAMTS20P59510 1910 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 APC2O95996 2303 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 CCDC66A2RUB6 948 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 KLK10O43240 276 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 NFKB1P19838 968 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 GPR3P46089 330 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 CLPPQ16740 277 aaPredicted RBP19.73■□□□□ 0.75
MSH5-215ENST00000482280 PDPK2PQ6A1A2 396 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 B3GNT8Q7Z7M8 397 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 PHYKPLQ8IUZ5 450 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 PTCD2Q8WV60 388 aaKnown RBP19.73■□□□□ 0.75
MSH5-215ENST00000482280 AHCYL2Q96HN2 611 aaKnown RBP19.73■□□□□ 0.75
MSH5-215ENST00000482280 FCRL3Q96P31 734 aaPredicted RBP19.73■□□□□ 0.75
MSH5-215ENST00000482280 TRIB3Q96RU7 358 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 BAG1Q99933 345 aaPredicted RBP19.73■□□□□ 0.75
MSH5-215ENST00000482280 RSPH14Q9UHP6 348 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 DMXL2Q8TDJ6 3036 aa19.73■□□□□ 0.75
MSH5-215ENST00000482280 URB1O60287 2271 aaKnown RBP19.73■□□□□ 0.75
MSH5-215ENST00000482280 APOC4-APOC2K7ER74 178 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 APOC2P02655 101 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 CTNNA1P35221 906 aaKnown RBP19.72■□□□□ 0.75
MSH5-215ENST00000482280 MARCKSL1P49006 195 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 PDX1P52945 283 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 RWDD2BP57060 319 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 TMPRSS3P57727 454 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 OR1D5P58170 312 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 DCDC1P59894 354 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 CXADRP78310 365 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 TLE3Q04726 772 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 XRCC4Q13426 336 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 ZDHHC20Q5W0Z9 365 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 ITPRIPL1Q6GPH6 555 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 BBS12Q6ZW61 710 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 TMC3Q7Z5M5 1100 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 SFTPA2Q8IWL1 248 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 TRAM1L1Q8N609 369 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 LRRC45Q96CN5 670 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 QKIQ96PU8 341 aaKnown RBP eCLIP19.72■□□□□ 0.75
MSH5-215ENST00000482280 SLC38A3Q99624 504 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 CARD9Q9H257 536 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 TRABDQ9H4I3 376 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 KCNK4Q9NYG8 393 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 PISDQ9UG56 409 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 LOXL2Q9Y4K0 774 aa19.72■□□□□ 0.75
MSH5-215ENST00000482280 FADS2P1A8MWK0 482 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 GPR89AB7ZAQ6 455 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 CASC3O15234 703 aaKnown RBP19.71■□□□□ 0.75
MSH5-215ENST00000482280 GRID2O43424 1007 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 ZNF189O75820 626 aaPredicted RBP19.71■□□□□ 0.75
MSH5-215ENST00000482280 GPR89BP0CG08 455 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 ACP5P13686 325 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 UGT1A5P35504 534 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 VAV2P52735 878 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 WNT3AP56704 352 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 KIF5AQ12840 1032 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 GTF2H3Q13889 308 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 PRPSAP1Q14558 356 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 TMEM164Q5U3C3 297 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 GPR155Q7Z3F1 870 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 CDKL3Q8IVW4 592 aaPredicted RBP19.71■□□□□ 0.75
MSH5-215ENST00000482280 SYCE1Q8N0S2 351 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 NAGSQ8N159 534 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 SLC25A41Q8N5S1 370 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 AVL9Q8NBF6 648 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 IPMKQ8NFU5 416 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 GDAP1Q8TB36 358 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 KRT35Q92764 455 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 SH3KBP1Q96B97 665 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 TADA1Q96BN2 335 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 TTC25Q96NG3 672 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 DPYSL5Q9BPU6 564 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 RDH14Q9HBH5 336 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 HACD3Q9P035 362 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 PRKAB1Q9Y478 270 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 PLEKHM1Q9Y4G2 1056 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 PCDHA3Q9Y5H8 950 aa19.71■□□□□ 0.75
MSH5-215ENST00000482280 ZZEF1O43149 2961 aa19.7■□□□□ 0.74
MSH5-215ENST00000482280 GOLGA6L9A6NEM1 432 aa19.7■□□□□ 0.74
MSH5-215ENST00000482280 BTNL10A8MVZ5 291 aa19.7■□□□□ 0.74
MSH5-215ENST00000482280 SNX2O60749 519 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms