RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 IGHEP01854 428 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 KRT14P02533 472 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 LMNAP02545 664 aaKnown RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 RSPH10BP0C881 870 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 EGR2P11161 476 aaPredicted RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 GABRB1P18505 474 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 EPORP19235 508 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 SERPINA4P29622 427 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 SLC15A1P46059 708 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 LMAN1P49257 510 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 CAPZA1P52907 286 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 PRKAG1P54619 331 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 ALDH18A1P54886 795 aaKnown RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 SLC8A3P57103 927 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 NOP14P78316 857 aaKnown RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 TNFRSF17Q02223 184 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 ZNF273Q14593 569 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 SGCBQ16585 318 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 SMTNL2Q2TAL5 461 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 LSM12Q3MHD2 195 aaKnown RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 TRIM60Q495X7 471 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 SLC9B1Q4ZJI4 515 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 CERCAMQ5T4B2 595 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 RIPPLY2Q5TAB7 128 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 CACHD1Q5VU97 1274 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 ARHGAP17Q68EM7 881 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 HEPHL1Q6MZM0 1159 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 RGS7BPQ6MZT1 257 aaPredicted RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 C6orf89Q6UWU4 347 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 TAS2R42Q7RTR8 314 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 MRGPREQ86SM8 312 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 WDR5BQ86VZ2 330 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 ERO1BQ86YB8 467 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 ZDHHC17Q8IUH5 632 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 DENND6AQ8IWF6 608 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 FAM185AQ8N0U4 392 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 SPARTQ8N0X7 666 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 AMER2Q8N7J2 671 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 ZNF565Q8N9K5 539 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 NHLRC2Q8NBF2 726 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 XXYLT1Q8NBI6 393 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 DBF4BQ8NFT6 615 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 AKR7LQ8NHP1 331 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 PROKR1Q8TCW9 393 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 RNASE8Q8TDE3 154 aaKnown RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 ROBO4Q8WZ75 1007 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 INPP5DQ92835 1189 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 ZNF668Q96K58 619 aaPredicted RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 FCRL4Q96PJ5 515 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 SECISBP2Q96T21 854 aaKnown RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 GAD1Q99259 594 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 GON7Q9BXV9 100 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 TPSD1Q9BZJ3 242 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 TMEM117Q9H0C3 514 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 P2RY12Q9H244 342 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 KLC4Q9NSK0 619 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 DNAJC11Q9NVH1 559 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 OR6C2Q9NZP2 312 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 ANKMY1Q9P2S6 941 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 LRIT1Q9P2V4 623 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 GABRQQ9UN88 632 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 STX8Q9UNK0 236 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 PRELID1Q9Y255 219 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 RCE1Q9Y256 329 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 NUDCQ9Y266 331 aa4.16□□□□□ -1.74
VPS41-212ENST00000482217 MRPS17Q9Y2R5 130 aaKnown RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 STRAPQ9Y3F4 350 aaKnown RBP4.16□□□□□ -1.74
VPS41-212ENST00000482217 A0A1B0GWJ7 208 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 NPIPB8E9PQR5 432 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 IFNL4K9M1U5 179 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 MED7O43513 233 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 SURF6O75683 361 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 SEC31AO94979 1220 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 ZNF202O95125 648 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 RASAL1O95294 804 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 MT-ATP6P00846 226 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 TFRCP02786 760 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 FYNP06241 537 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 CSF1RP07333 972 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 GALTP07902 379 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 RPSAP08865 295 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 STAG3L3P0CL85 134 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 RALAP11233 206 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 APEHP13798 732 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 PPP3CBP16298 524 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 FUT1P19526 365 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 HNRNPA2B1P22626 353 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 PRKACBP22694 351 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 ACAT1P24752 427 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 CD27P26842 260 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 MST1P26927 711 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 PSMA5P28066 241 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 HTR2BP41595 481 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 KHKP50053 298 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 ARHGDIBP52566 201 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 GSTO1P78417 241 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 DGCR2P98153 550 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 TAP1Q03518 808 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 DMPKQ09013 629 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms