RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 GOLGA6CA6NDK9 693 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 GOLGA6BA6NDN3 693 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 NPIPB15A6NHN6 443 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 LRRC10BA6NIK2 292 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 B4E171 279 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 PPM1DO15297 605 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 KRT86O43790 486 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 LRCH4O75427 683 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 IVLP07476 585 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 GOLGA6DP0CG33 693 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 TEAD1P28347 426 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 HSPA9P38646 679 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 ADCY8P40145 1251 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 TSPAN7P41732 249 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 HCAR3P49019 387 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 RAB15P59190 212 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 MYL5Q02045 173 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 BIRC2Q13490 618 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 TRA2AQ13595 282 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 NR6A1Q15406 480 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 CRTC2Q53ET0 693 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 RAET1GQ6H3X3 334 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 DOK6Q6PKX4 331 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 RBM43Q6ZSC3 357 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 RFLNAQ6ZTI6 216 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 Q6ZVL8 140 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 TSPAN33Q86UF1 283 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 PSTKQ8IV42 348 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 NAGSQ8N159 534 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 PGBD5Q8N414 524 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 LZTR1Q8N653 840 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 TTC13Q8NBP0 860 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 OR4D9Q8NGE8 314 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 MCCC1Q96RQ3 725 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 NUDCD1Q96RS6 583 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 MGME1Q9BQP7 344 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 SLC29A3Q9BZD2 475 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 ZMYND15Q9H091 742 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 HSD3B7Q9H2F3 369 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 ETNK2Q9NVF9 386 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 KCTD5Q9NXV2 234 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 GOLGA6AQ9NYA3 693 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 PLEKHM1Q9Y4G2 1056 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 RPS6KL1Q9Y6S9 549 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 PCNX1Q96RV3 2341 aa9.37□□□□□ -0.91
SMARCE1-210ENST00000481231 A0A0U1RQS6 177 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 A8MU76 341 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 PSMD11O00231 422 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 ZW10O43264 779 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 RNF8O76064 485 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 PGLSO95336 258 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 DLGAP3O95886 979 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 SOD1P00441 154 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 CCDC172P0C7W6 258 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 CYP2A6P11509 494 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 ATP1A3P13637 1013 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 TCF4P15884 667 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 TNFAIP3P21580 790 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 IL1R2P27930 398 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 DLSTP36957 453 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 ACTR1BP42025 376 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 PGDP52209 483 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 ZNF135P52742 658 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 ACTR1AP61163 376 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 SQSTM1Q13501 440 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 SNAP47Q5SQN1 464 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 CPZQ66K79 652 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 PPP1R2P3Q6NXS1 205 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 ADAMTSL4Q6UY14 1074 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 TECPR1Q7Z6L1 1165 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 TRIM74Q86UV6 250 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 ZNF761Q86XN6 746 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 Q8NA96 180 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 FNIP1Q8TF40 1166 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 C19orf60Q96EN9 201 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 SCRN2Q96FV2 425 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 TEFMQ96QE5 360 aaKnown RBP9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 SMIM14Q96QK8 99 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 OR2M4Q96R27 311 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 MFRPQ9BY79 579 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 ZWILCHQ9H900 591 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 LMBRD1Q9NUN5 540 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 CROTQ9UKG9 612 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 MYO6Q9UM54 1294 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 PHTF1Q9UMS5 762 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 ENTPD4Q9Y227 616 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 TMEM98Q9Y2Y6 226 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 TMEM184BQ9Y519 407 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 PCDHB3Q9Y5E6 796 aa9.36□□□□□ -0.91
SMARCE1-210ENST00000481231 TNRC6AQ8NDV7 1962 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-210ENST00000481231 H3BRJ5 948 aa9.35□□□□□ -0.91
SMARCE1-210ENST00000481231 MAFKO60675 156 aa9.35□□□□□ -0.91
SMARCE1-210ENST00000481231 KATNA1O75449 491 aa9.35□□□□□ -0.91
SMARCE1-210ENST00000481231 FTLP02792 175 aaPredicted RBP9.35□□□□□ -0.91
SMARCE1-210ENST00000481231 CTPS1P17812 591 aa9.35□□□□□ -0.91
SMARCE1-210ENST00000481231 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-210ENST00000481231 AMPD1P23109 780 aa9.35□□□□□ -0.91
SMARCE1-210ENST00000481231 NFKBIAP25963 317 aa9.35□□□□□ -0.91
SMARCE1-210ENST00000481231 MMP13P45452 471 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms