RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 VPS18Q9P253 973 aa10.75□□□□□ -0.69
ATG4B-219ENST00000479941 MOSPD1Q9UJG1 213 aa10.75□□□□□ -0.69
ATG4B-219ENST00000479941 PCOLCE2Q9UKZ9 415 aa10.75□□□□□ -0.69
ATG4B-219ENST00000479941 CNOT6Q9ULM6 557 aaKnown RBP10.75□□□□□ -0.69
ATG4B-219ENST00000479941 KCTD3Q9Y597 815 aa10.75□□□□□ -0.69
ATG4B-219ENST00000479941 CACNA1AO00555 2505 aa10.75□□□□□ -0.69
ATG4B-219ENST00000479941 PRSS38A1L453 326 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 MROH6A6NGR9 719 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 GPR89AB7ZAQ6 455 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 H7C0S8 307 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 SCAMP1O15126 338 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 CBFA2T3O75081 653 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 SLC25A14O95258 325 aaPredicted RBP10.74□□□□□ -0.69
ATG4B-219ENST00000479941 ASMTLO95671 621 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 IVLP07476 585 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 GPR89BP0CG08 455 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 ALPPL2P10696 532 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 ADCY8P40145 1251 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 PTGIRP43119 386 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 NPY2RP49146 381 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 SEPT6Q14141 434 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 DHX34Q14147 1143 aaKnown RBP10.74□□□□□ -0.69
ATG4B-219ENST00000479941 PTPRCAPQ14761 206 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 SKIDA1Q1XH10 827 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 ATP13A5Q4VNC0 1218 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 CERCAMQ5T4B2 595 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 FAM151BQ6UXP7 276 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 PCGF5Q86SE9 256 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 MCUQ8NE86 351 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 OR13C4Q8NGS5 318 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 BAHD1Q8TBE0 780 aaPredicted RBP10.74□□□□□ -0.69
ATG4B-219ENST00000479941 ZNF398Q8TD17 642 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 LMX1AQ8TE12 382 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 PEX13Q92968 403 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 PDXPQ96GD0 296 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 SCARF2Q96GP6 870 aaPredicted RBP10.74□□□□□ -0.69
ATG4B-219ENST00000479941 CDC6Q99741 560 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 LRRC61Q9BV99 259 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 DUSP23Q9BVJ7 150 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 IL22Q9GZX6 179 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 TCEAL2Q9H3H9 227 aaPredicted RBP10.74□□□□□ -0.69
ATG4B-219ENST00000479941 RMI1Q9H9A7 625 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 CARS2Q9HA77 564 aaKnown RBP10.74□□□□□ -0.69
ATG4B-219ENST00000479941 CYP4F12Q9HCS2 524 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 MRPL40Q9NQ50 206 aaKnown RBP10.74□□□□□ -0.69
ATG4B-219ENST00000479941 NLE1Q9NVX2 485 aaPredicted RBP10.74□□□□□ -0.69
ATG4B-219ENST00000479941 UCKL1Q9NWZ5 548 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 TRNAU1APQ9NX07 287 aaKnown RBP10.74□□□□□ -0.69
ATG4B-219ENST00000479941 ASIC3Q9UHC3 531 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 FKBPLQ9UIM3 349 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 CDC23Q9UJX2 597 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 RIMKLBQ9ULI2 386 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 SUFUQ9UMX1 484 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 TMEM98Q9Y2Y6 226 aa10.74□□□□□ -0.69
ATG4B-219ENST00000479941 PCNX2A6NKB5 2137 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 SPTBN2O15020 2390 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 TCRBV7S3A2A0A539 114 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 DCDC2BA2VCK2 349 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 LMO7DNF2Z398 122 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 GAPDHSO14556 408 aaPredicted RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 TPP1O14773 563 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 NUAK1O60285 661 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 SRP72O76094 671 aaKnown RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 URI1O94763 535 aaPredicted RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 KCNK5O95279 499 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 PRAMEF1O95521 474 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 MLNP12872 115 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 PSMA3P25788 255 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 POLD2P49005 469 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 TERF1P54274 439 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 SESN2P58004 480 aaPredicted RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 TMPRSS15P98073 1019 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 XIAPP98170 497 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 CKAP4Q07065 602 aaKnown RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 TUBB2AQ13885 445 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 CHRNA6Q15825 494 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 KCTD19Q17RG1 926 aaPredicted RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 CCDC38Q502W7 563 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 PCID2Q5JVF3 399 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 LDLRAP1Q5SW96 308 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 ARMC3Q5W041 872 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 DOK6Q6PKX4 331 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 LVRNQ6Q4G3 990 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 ZNF534Q76KX8 674 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 ZNF572Q7Z3I7 529 aaPredicted RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 MAATS1Q7Z4T9 603 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 TRIM74Q86UV6 250 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 GKN2Q86XP6 184 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 JAMLQ86YT9 394 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 PPIL6Q8IXY8 311 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 EID2Q8N6I1 236 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 DEFB124Q8NES8 71 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 PPHLN1Q8NEY8 458 aaKnown RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 OR4C6Q8NH72 309 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 GDAP1Q8TB36 358 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 SCG3Q8WXD2 468 aaKnown RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 ZNF592Q92610 1267 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 CDKN2AIPNLQ96HQ2 116 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 DNAJC1Q96KC8 554 aaKnown RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 KRT12Q99456 494 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms