RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 AP1B1Q10567 949 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 ZBTB17Q13105 803 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 NR1D2Q14995 579 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 SPA17Q15506 151 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 PYCR3Q53H96 274 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 TAF1BQ53T94 588 aaPredicted RBP14.24□□□□□ -0.13
ATG4B-218ENST00000479554 ODF2Q5BJF6 829 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 CCDC81Q6ZN84 652 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 ZNF662Q6ZS27 426 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 TMPRSS9Q7Z410 1059 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 VSIG1Q86XK7 387 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 NAGSQ8N159 534 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 TXLNBQ8N3L3 684 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 PATE1Q8WXA2 126 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 COX14Q96I36 57 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 MAK16Q9BXY0 300 aaKnown RBP14.24□□□□□ -0.13
ATG4B-218ENST00000479554 ADGRE3Q9BY15 652 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 SEMA6CQ9H3T2 930 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 RDH14Q9HBH5 336 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 PKD2L2Q9NZM6 624 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 AKAP7Q9P0M2 348 aaPredicted RBP14.24□□□□□ -0.13
ATG4B-218ENST00000479554 PLEKHM1Q9Y4G2 1056 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 CFAP46Q8IYW2 2715 aa14.24□□□□□ -0.13
ATG4B-218ENST00000479554 ARHGEF17Q96PE2 2063 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-218ENST00000479554 C3orf70A6NLC5 250 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-218ENST00000479554 ANKRD66B4E2M5 251 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 K7ENP7 123 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 PPP1R12AO14974 1030 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-218ENST00000479554 B4GAT1O43505 415 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 C1QL1O75973 258 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 MTA2O94776 668 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 LCA5LO95447 670 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 ZFXP17010 805 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-218ENST00000479554 GPR3P46089 330 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 SPINT3P49223 89 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 ETF1P62495 437 aaKnown RBP14.23□□□□□ -0.13
ATG4B-218ENST00000479554 LRP8Q14114 963 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 PDK1Q15118 436 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 CLPPQ16740 277 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-218ENST00000479554 QPCTQ16769 361 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 SLC9A4Q6AI14 798 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 INO80CQ6PI98 192 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-218ENST00000479554 RFX6Q8HWS3 928 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 CNTD1Q8N815 330 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 CCHCR1Q8TD31 782 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 SNRNP27Q8WVK2 155 aaKnown RBP14.23□□□□□ -0.13
ATG4B-218ENST00000479554 CCNL2Q96S94 520 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-218ENST00000479554 NUDT22Q9BRQ3 303 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 MLPHQ9BV36 600 aaPredicted RBP14.23□□□□□ -0.13
ATG4B-218ENST00000479554 CEP41Q9BYV8 373 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 SEPT10Q9P0V9 454 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 VPS18Q9P253 973 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 ACSL6Q9UKU0 697 aa14.23□□□□□ -0.13
ATG4B-218ENST00000479554 REXO2Q9Y3B8 237 aaKnown RBP14.23□□□□□ -0.13
ATG4B-218ENST00000479554 SCN8AQ9UQD0 1980 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 RGSL1A5PLK6 1076 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 NVLO15381 856 aaKnown RBP14.22□□□□□ -0.13
ATG4B-218ENST00000479554 LIPCP11150 499 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 ETV5P41161 510 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 MAPK10P53779 464 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 GALNT3Q14435 633 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 HENMT1Q5T8I9 393 aaKnown RBP14.22□□□□□ -0.13
ATG4B-218ENST00000479554 LRRC38Q5VT99 294 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 PCSK4Q6UW60 755 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 NPNTQ6UXI9 565 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 USP53Q70EK8 1073 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 KIAA1328Q86T90 577 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 RHOT1Q8IXI2 618 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 KIF18AQ8NI77 898 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 AGAP3Q96P47 875 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 OLFM3Q96PB7 478 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 ZMYND15Q9H091 742 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 FAM83DQ9H4H8 585 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 LUC7LQ9NQ29 371 aaKnown RBP14.22□□□□□ -0.13
ATG4B-218ENST00000479554 DDX56Q9NY93 547 aaKnown RBP14.22□□□□□ -0.13
ATG4B-218ENST00000479554 ZNHIT2Q9UHR6 403 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 OAS3Q9Y6K5 1087 aaKnown RBP14.22□□□□□ -0.13
ATG4B-218ENST00000479554 UNC13CQ8NB66 2214 aa14.22□□□□□ -0.13
ATG4B-218ENST00000479554 PRAMEF33A0A0G2JMD5 474 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 FADS2P1A8MWK0 482 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 PPM1DO15297 605 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 SPOPO43791 374 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 KIF5CO60282 957 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 PRAMEF10O60809 474 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 SLC4A1P02730 911 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 ATP1A1P05023 1023 aaKnown RBP14.21□□□□□ -0.13
ATG4B-218ENST00000479554 CD1CP29017 333 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 SLC1A1P43005 524 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 PPM1FP49593 454 aaPredicted RBP14.21□□□□□ -0.13
ATG4B-218ENST00000479554 VAV2P52735 878 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 DYNLT1P63172 113 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 C16orf72Q14CZ0 275 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 LYSMD3Q7Z3D4 306 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 NT5DC3Q86UY8 548 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 SLC37A2Q8TED4 501 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 USP7Q93009 1102 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 RNF25Q96BH1 459 aaPredicted RBP14.21□□□□□ -0.13
ATG4B-218ENST00000479554 IMP4Q96G21 291 aaKnown RBP14.21□□□□□ -0.13
ATG4B-218ENST00000479554 WBP1Q96G27 269 aa14.21□□□□□ -0.13
ATG4B-218ENST00000479554 CCDC74BQ96LY2 380 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms