RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 AP1G1O43747 822 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 SNAP91O60641 907 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 NBNO60934 754 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 SRP72O76094 671 aaKnown RBP10.75□□□□□ -0.69
VPS52-217ENST00000478934 FGF1P05230 155 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 RPS6KA3P51812 740 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 RHDQ02161 417 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 PTPRNQ16849 979 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 HABP4Q5JVS0 413 aaKnown RBP10.75□□□□□ -0.69
VPS52-217ENST00000478934 GLT6D1Q7Z4J2 308 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 ABI1Q8IZP0 508 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 TET1Q8NFU7 2136 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 HIC2Q96JB3 615 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 C1orf50Q9BV19 199 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 SLC25A23Q9BV35 468 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 NACA2Q9H009 215 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 SUCOQ9UBS9 1254 aaKnown RBP10.75□□□□□ -0.69
VPS52-217ENST00000478934 FKBPLQ9UIM3 349 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.75□□□□□ -0.69
VPS52-217ENST00000478934 SMIM31A0A1B0GVY4 71 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 ARHGAP10A1A4S6 786 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 SLC38A8A6NNN8 435 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 BTN3A1O00481 513 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 MTHFD1P11586 935 aaKnown RBP10.75□□□□□ -0.69
VPS52-217ENST00000478934 NCK1P16333 377 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 HLA-DPA1P20036 260 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 CA5AP35218 305 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 MAGEA11P43364 429 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 ZNF140P52738 457 aaPredicted RBP10.75□□□□□ -0.69
VPS52-217ENST00000478934 HK3P52790 923 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 PLOD1Q02809 727 aaPredicted RBP10.75□□□□□ -0.69
VPS52-217ENST00000478934 CLCQ05315 142 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 FUT11Q495W5 492 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 RABL3Q5HYI8 236 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 C8orf82Q6P1X6 216 aaPredicted RBP10.75□□□□□ -0.69
VPS52-217ENST00000478934 FUT10Q6P4F1 479 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 AFAP1L2Q8N4X5 818 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 DNAJB14Q8TBM8 379 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 DLG3Q92796 817 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 CASD1Q96PB1 797 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 RBM38Q9H0Z9 239 aaKnown RBP10.75□□□□□ -0.69
VPS52-217ENST00000478934 SOX17Q9H6I2 414 aaPredicted RBP10.75□□□□□ -0.69
VPS52-217ENST00000478934 CMTM6Q9NX76 183 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 SMPD4Q9NXE4 827 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 FNIP2Q9P278 1114 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 SARDHQ9UL12 918 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 ABT1Q9ULW3 272 aaKnown RBP10.75□□□□□ -0.69
VPS52-217ENST00000478934 PDE4DIPQ5VU43 2346 aa10.75□□□□□ -0.69
VPS52-217ENST00000478934 TMEM189-UBE2V1I3L0A0 370 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 ACSL4O60488 711 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 NDST3O95803 873 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 ALDH2P05091 517 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 C8BP07358 591 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 OXTRP30559 389 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 SLC5A2P31639 672 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 GPR17Q13304 367 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 KANK2Q63ZY3 851 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 SYVN1Q86TM6 617 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 DHFR2Q86XF0 187 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 CHERPQ8IWX8 916 aaKnown RBP10.74□□□□□ -0.69
VPS52-217ENST00000478934 AHI1Q8N157 1196 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 FBXO39Q8N4B4 442 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 OR6K2Q8NGY2 324 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 OR2T11Q8NH01 316 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 EEF1AKMT1Q8WVE0 214 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 BIRC8Q96P09 236 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 CCT7Q99832 543 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 CINPQ9BW66 212 aaPredicted RBP10.74□□□□□ -0.69
VPS52-217ENST00000478934 MRPS26Q9BYN8 205 aaKnown RBP10.74□□□□□ -0.69
VPS52-217ENST00000478934 RNF38Q9H0F5 515 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 BCAP29Q9UHQ4 241 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 FXYD1O00168 92 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 SYN3O14994 580 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 STX1BP61266 288 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 NKX3-2P78367 333 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 PLIN5Q00G26 463 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 GALNT1Q10472 559 aaPredicted RBP10.74□□□□□ -0.69
VPS52-217ENST00000478934 DYNC1I2Q13409 638 aaKnown RBP10.74□□□□□ -0.69
VPS52-217ENST00000478934 MAP7D1Q3KQU3 841 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 ZBTB49Q6ZSB9 765 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 SLC15A3Q8IY34 581 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 CPNE9Q8IYJ1 553 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 TRIML2Q8N7C3 387 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 FAM47BQ8NA70 645 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 PCSK9Q8NBP7 692 aaKnown RBP10.74□□□□□ -0.69
VPS52-217ENST00000478934 TSPAN14Q8NG11 270 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 GPR150Q8NGU9 434 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 STON2Q8WXE9 905 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 FATE1Q969F0 183 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 FUBP1Q96AE4 644 aaKnown RBP10.74□□□□□ -0.69
VPS52-217ENST00000478934 GLT1D1Q96MS3 346 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 TMEM74Q96NL1 305 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 SLC2A11Q9BYW1 496 aa10.74□□□□□ -0.69
VPS52-217ENST00000478934 TCRBV3S1A0A5B6 114 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 ASPDHA6ND91 283 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 TMX2-CTNND1H3BSU7 103 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 INSIG1O15503 277 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 COCHO43405 550 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 NDUFS3O75489 264 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 BAIAP3O94812 1187 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms