RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 KIAA0754O94854 1291 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 NDUFA10O95299 355 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 CLDN1O95832 211 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 C9P02748 559 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 PYGLP06737 847 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 SLC2A4P14672 509 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 COL8A1P27658 744 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 CASP14P31944 242 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 RPL7AP62424 266 aaKnown RBP20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 PTPRRQ15256 657 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 PPP1R15BQ5SWA1 713 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 AVL9Q8NBF6 648 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 TBC1D10AQ9BXI6 508 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 VPS16Q9H269 839 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 NOD2Q9HC29 1040 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 MLXIPLQ9NP71 852 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 VPS18Q9P253 973 aa20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 PCDHGA9Q9Y5G4 932 aaKnown RBP20.05■□□□□ 0.8
PDLIM1-202ENST00000477757 MED13Q9UHV7 2174 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 KIR2DS5A0A0G2JLQ3 304 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 A0A0G2JNG1 304 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 C21orf140B9A014 251 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 KIR2DS3K7RE56 304 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 PES1O00541 588 aaKnown RBP20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 TOX3O15405 576 aaPredicted RBP20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 DNAJC6O75061 913 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 PGLSO95336 258 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 F3P13726 295 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 ERCC2P18074 760 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 SOX5P35711 763 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 JAM2P57087 298 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 KIR2DS5Q14953 304 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 CA9Q16790 459 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 NLRP8Q86W28 1048 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 PGBD5Q8N414 524 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 MLKLQ8NB16 471 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 SCAMP4Q969E2 229 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 OR6C1Q96RD1 312 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 MGME1Q9BQP7 344 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 ZNF768Q9H5H4 540 aaKnown RBP20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 DHX35Q9H5Z1 703 aaKnown RBP20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 CPNE7Q9UBL6 633 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 ZNHIT2Q9UHR6 403 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 LNPEPQ9UIQ6 1025 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 KCNK6Q9Y257 313 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 PPIL1Q9Y3C6 166 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 PRKAB1Q9Y478 270 aa20.04■□□□□ 0.8
PDLIM1-202ENST00000477757 WIPF3A6NGB9 483 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 PEX11BO96011 259 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 DESP17661 470 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 TNFRSF8P28908 595 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 SH3BP2P78314 561 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 INPP5JQ15735 1006 aaPredicted RBP20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 HSP90AA4PQ58FG1 418 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 PAPD7Q5XG87 772 aaKnown RBP20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 LRRC66Q68CR7 880 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 CHST15Q7LFX5 561 aaPredicted RBP20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 RASGRP3Q8IV61 690 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 EXD1Q8NHP7 514 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 CT55Q8WUE5 264 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 SEC14L1Q92503 715 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 AGAP2Q99490 1192 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 SLC25A23Q9BV35 468 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 SLC29A3Q9BZD2 475 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 ACTL8Q9H568 366 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 UCK1Q9HA47 277 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 OGFRQ9NZT2 677 aa20.03■□□□□ 0.8
PDLIM1-202ENST00000477757 A0A0U1RQS6 177 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 TCP11X1B4DZS4 312 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 DAPK3O43293 454 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 ASMTLO95671 621 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 MT-ND3P03897 115 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 CCNYL3P0C7X3 344 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 FGF5P12034 268 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 ACP5P13686 325 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 CTPS1P17812 591 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 UBE2IP63279 158 aaKnown RBP20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 OGDHQ02218 1023 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 MRPL49Q13405 166 aaKnown RBP20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 PRR30Q53SZ7 412 aaPredicted RBP20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 RALGPS1Q5JS13 557 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 ARMC12Q5T9G4 340 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 CPZQ66K79 652 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 TP53INP2Q8IXH6 220 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 THAP4Q8WY91 577 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 KCTD15Q96SI1 283 aaPredicted RBP20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 SNRNP25Q9BV90 132 aaKnown RBP20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 BRD8Q9H0E9 1235 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 PADI1Q9ULC6 663 aa20.02■□□□□ 0.8
PDLIM1-202ENST00000477757 OR5K4A6NMS3 321 aa20.01■□□□□ 0.79
PDLIM1-202ENST00000477757 SNX2O60749 519 aa20.01■□□□□ 0.79
PDLIM1-202ENST00000477757 GADD45BO75293 160 aaPredicted RBP20.01■□□□□ 0.79
PDLIM1-202ENST00000477757 LDLRP01130 860 aa20.01■□□□□ 0.79
PDLIM1-202ENST00000477757 UGT8Q16880 541 aa20.01■□□□□ 0.79
PDLIM1-202ENST00000477757 EIF2S3LQ2VIR3 472 aaKnown RBP20.01■□□□□ 0.79
PDLIM1-202ENST00000477757 PIH1D2Q8WWB5 315 aa20.01■□□□□ 0.79
PDLIM1-202ENST00000477757 TGM7Q96PF1 710 aa20.01■□□□□ 0.79
PDLIM1-202ENST00000477757 RIOK2Q9BVS4 552 aaKnown RBP20.01■□□□□ 0.79
PDLIM1-202ENST00000477757 LHX9Q9NQ69 397 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms