RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 PLK5Q496M5 336 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 LRRC66Q68CR7 880 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 PMS2CLQ68D20 193 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 ZC3H14Q6PJT7 736 aaKnown RBP16.81■□□□□ 0.28
EPHB4-204ENST00000477446 UNC5AQ6ZN44 842 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 LPCAT2Q7L5N7 544 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 LYSMD3Q7Z3D4 306 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 C4orf33Q8N1A6 199 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 AGGF1Q8N302 714 aaeCLIP16.81■□□□□ 0.28
EPHB4-204ENST00000477446 CBARPQ8N350 705 aaPredicted RBP16.81■□□□□ 0.28
EPHB4-204ENST00000477446 BANPQ8N9N5 519 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 DNAAF3Q8N9W5 541 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 BLOC1S5Q8TDH9 187 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 KLK6Q92876 244 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 STAMBPL1Q96FJ0 436 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 ZC3H10Q96K80 434 aaKnown RBP16.81■□□□□ 0.28
EPHB4-204ENST00000477446 KCNH6Q9H252 994 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 VPS11Q9H270 941 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.81■□□□□ 0.28
EPHB4-204ENST00000477446 COQ6Q9Y2Z9 468 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 ZNF711Q9Y462 761 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 USP34Q70CQ2 3546 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 FAM159BA6NKW6 160 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 AURKAO14965 403 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 LATO43561 262 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 ZNF30P17039 623 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 GM2AP17900 193 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 RPA3P35244 121 aaPredicted RBP16.81■□□□□ 0.28
EPHB4-204ENST00000477446 FGL2Q14314 439 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 EFTUD2Q15029 972 aaKnown RBP eCLIP16.81■□□□□ 0.286e-7■■■■□ 19.5
EPHB4-204ENST00000477446 LRRC8CQ8TDW0 803 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 CDKL2Q92772 493 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 EID2BQ96D98 161 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 HSPA12BQ96MM6 686 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 SRPK1Q96SB4 655 aaKnown RBP16.81■□□□□ 0.28
EPHB4-204ENST00000477446 C1QTNF2Q9BXJ5 285 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 PITPNM3Q9BZ71 974 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 EBF2Q9HAK2 575 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 ZFYVE1Q9HBF4 777 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 MOCS1Q9NZB8 636 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 MAD1L1Q9Y6D9 718 aa16.81■□□□□ 0.28
EPHB4-204ENST00000477446 GOLGA8CPA6NN73 597 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 TM7SF2O76062 418 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 PAK4O96013 591 aaPredicted RBP16.8■□□□□ 0.28
EPHB4-204ENST00000477446 PGAM1P18669 254 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 PTGER3P43115 390 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 PTPN5P54829 565 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 CERCAMQ5T4B2 595 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 PRR23BQ6ZRT6 265 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 ARMCX6Q7L4S7 300 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 SPATA21Q7Z572 469 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 HSD11B1LQ7Z5J1 315 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 CTAGE3PQ8IX95 158 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 PPM1NQ8N819 430 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 GBP7Q8N8V2 638 aaPredicted RBP16.8■□□□□ 0.28
EPHB4-204ENST00000477446 CCT6BQ92526 530 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 FOXJ1Q92949 421 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 PAIP2Q9BPZ3 127 aaKnown RBP16.8■□□□□ 0.28
EPHB4-204ENST00000477446 SLC17A9Q9BYT1 436 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 GPR63Q9BZJ6 419 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 MLXIPLQ9NP71 852 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 FGFR1OP2Q9NVK5 253 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 HACD3Q9P035 362 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 ARL2BPQ9Y2Y0 163 aa16.8■□□□□ 0.28
EPHB4-204ENST00000477446 TNRC6BQ9UPQ9 1833 aaKnown RBP16.8■□□□□ 0.28
EPHB4-204ENST00000477446 MAGEB16A2A368 324 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 PSMD11O00231 422 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 LZTS3O60299 673 aaPredicted RBP16.79■□□□□ 0.28
EPHB4-204ENST00000477446 RHOBTB1O94844 696 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 SLC4A1P02730 911 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 GSTA1P08263 222 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 C1SP09871 688 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 STC1P52823 247 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 SGCGQ13326 291 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 MTM1Q13496 603 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 FRG1Q14331 258 aaKnown RBP16.79■□□□□ 0.28
EPHB4-204ENST00000477446 POU6F1Q14863 301 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 ACOX1Q15067 660 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 LVRNQ6Q4G3 990 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 GLT6D1Q7Z4J2 308 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 TTC30BQ8N4P2 665 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 BRSK1Q8TDC3 778 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 SNX19Q92543 992 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 APOPT1Q96IL0 206 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 COQ10AQ96MF6 247 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 MKS1Q9NXB0 559 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 CACNA1HO95180 2353 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 SCN8AQ9UQD0 1980 aa16.79■□□□□ 0.28
EPHB4-204ENST00000477446 PLXNA2O75051 1894 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 MEI4A8MW99 385 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 SLC31A1O15431 190 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 RECQL5O94762 991 aaPredicted RBP16.78■□□□□ 0.28
EPHB4-204ENST00000477446 MAOBP27338 520 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 FOXN2P32314 431 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 ETV3P41162 512 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 DHPSP49366 369 aaPredicted RBP16.78■□□□□ 0.28
EPHB4-204ENST00000477446 SESN2P58004 480 aaPredicted RBP16.78■□□□□ 0.28
EPHB4-204ENST00000477446 CREB5Q02930 508 aa16.78■□□□□ 0.28
EPHB4-204ENST00000477446 TAF1AQ15573 450 aaPredicted RBP16.78■□□□□ 0.28
EPHB4-204ENST00000477446 SETMARQ53H47 684 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms