RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 NSUN5P2Q63ZY6 315 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 ATG9AQ7Z3C6 839 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 ARID3BQ8IVW6 561 aaPredicted RBP5.95□□□□□ -1.46
VPS50-212ENST00000476413 POGLUT1Q8NBL1 392 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 OR2AK2Q8NG84 335 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 OR1J2Q8NGS2 313 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 HM13Q8TCT9 377 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 PGAP3Q96FM1 320 aaPredicted RBP5.95□□□□□ -1.46
VPS50-212ENST00000476413 ZMAT2Q96NC0 199 aaKnown RBP5.95□□□□□ -1.46
VPS50-212ENST00000476413 DGAT2Q96PD7 388 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 PPIL3Q9H2H8 161 aaKnown RBP5.95□□□□□ -1.46
VPS50-212ENST00000476413 SLC35C2Q9NQQ7 365 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 CCDC177Q9NQR7 707 aaPredicted RBP5.95□□□□□ -1.46
VPS50-212ENST00000476413 PSD3Q9NYI0 1048 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 ELOVL5Q9NYP7 299 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 ANAPC2Q9UJX6 822 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 INSL5Q9Y5Q6 135 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 TRPV2Q9Y5S1 764 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 PTGDR2Q9Y5Y4 395 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 TTC3P53804 2025 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 CKAP5Q14008 2032 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 PLPP2O43688 288 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 PSMD10O75832 226 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 TOMM40O96008 361 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 RPL3P39023 403 aaKnown RBP5.94□□□□□ -1.46
VPS50-212ENST00000476413 HNRNPH2P55795 449 aaKnown RBP5.94□□□□□ -1.46
VPS50-212ENST00000476413 Q0VFX4 171 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 GRSF1Q12849 480 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS50-212ENST00000476413 MYLK3Q32MK0 819 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 FSCBQ5H9T9 825 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 FRG2Q64ET8 278 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 EPHX4Q8IUS5 362 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 CHERPQ8IWX8 916 aaKnown RBP5.94□□□□□ -1.46
VPS50-212ENST00000476413 NKAIN3Q8N8D7 197 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 TDRD5Q8NAT2 981 aaKnown RBP5.94□□□□□ -1.46
VPS50-212ENST00000476413 APPL2Q8NEU8 664 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 OIT3Q8WWZ8 545 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 C17orf75Q9HAS0 396 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 ZCCHC17Q9NP64 241 aaKnown RBP5.94□□□□□ -1.46
VPS50-212ENST00000476413 POT1Q9NUX5 634 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 CRNNQ9UBG3 495 aaPredicted RBP5.94□□□□□ -1.46
VPS50-212ENST00000476413 PADI3Q9ULW8 664 aa5.94□□□□□ -1.46
VPS50-212ENST00000476413 LOC100509620A0A075B734 347 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 GPR75-ASB3A0A0A6YYF3 556 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 TMEM8BA6NDV4 472 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 GLULP15104 373 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 AMTP48728 403 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 LIG4P49917 911 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 CSNK2A1P68400 391 aaPredicted RBP5.93□□□□□ -1.46
VPS50-212ENST00000476413 TMF1P82094 1093 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 ROR2Q01974 943 aaKnown RBP5.93□□□□□ -1.46
VPS50-212ENST00000476413 DECR1Q16698 335 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 SPECC1Q5M775 1068 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 DUS1LQ6P1R4 473 aaKnown RBP5.93□□□□□ -1.46
VPS50-212ENST00000476413 SLC36A4Q6YBV0 504 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 IRF2BP2Q7Z5L9 587 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 ADIPOR2Q86V24 386 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 DSELQ8IZU8 1212 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 RASGEF1CQ8N431 466 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 PCDH20Q8N6Y1 951 aaKnown RBP5.93□□□□□ -1.46
VPS50-212ENST00000476413 POMGNT2Q8NAT1 580 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 CSNK2A3Q8NEV1 391 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 NSMCE1Q8WV22 266 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 ADAMTS14Q8WXS8 1223 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 CNDP2Q96KP4 475 aaKnown RBP5.93□□□□□ -1.46
VPS50-212ENST00000476413 DACH2Q96NX9 599 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 GFI1Q99684 422 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 DENND2DQ9H6A0 471 aaPredicted RBP5.93□□□□□ -1.46
VPS50-212ENST00000476413 TAB2Q9NYJ8 693 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 WDR35Q9P2L0 1181 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 STK39Q9UEW8 545 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 AGO1Q9UL18 857 aaKnown RBP5.93□□□□□ -1.46
VPS50-212ENST00000476413 FZD10Q9ULW2 581 aa5.93□□□□□ -1.46
VPS50-212ENST00000476413 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.93□□□□□ -1.46
VPS50-212ENST00000476413 A8MXE2 369 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 ASAP2O43150 1006 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 RSL1D1O76021 490 aaKnown RBP5.92□□□□□ -1.46
VPS50-212ENST00000476413 BDKRB2P30411 391 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 STX2P32856 288 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 FASLGP48023 281 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 LMAN1P49257 510 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 PRPF4BQ13523 1007 aaKnown RBP5.92□□□□□ -1.46
VPS50-212ENST00000476413 TWIST1Q15672 202 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 C9orf152Q5JTZ5 239 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 DAB2IPQ5VWQ8 1189 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 CEP97Q8IW35 865 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 GUF1Q8N442 669 aaKnown RBP5.92□□□□□ -1.46
VPS50-212ENST00000476413 PRR26Q8N8Z3 221 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 ZBTB8BQ8NAP8 495 aaPredicted RBP5.92□□□□□ -1.46
VPS50-212ENST00000476413 ORAI1Q96D31 301 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 NUDCD1Q96RS6 583 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 KRTAP17-1Q9BYP8 105 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 ANKRD2Q9GZV1 360 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 SIL1Q9H173 461 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 DNAJC18Q9H819 358 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 NOX4Q9NPH5 578 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 TRMT1Q9NXH9 659 aaKnown RBP5.92□□□□□ -1.46
VPS50-212ENST00000476413 GDE1Q9NZC3 331 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 ZNF148Q9UQR1 794 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 PAM16Q9Y3D7 125 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms