RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 UGT3A2Q3SY77 523 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 RBM20Q5T481 1227 aaKnown RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 LYPD8Q6UX82 237 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 TAS2R42Q7RTR8 314 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 BPHLQ86WA6 291 aaPredicted RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 CMTR2Q8IYT2 770 aaKnown RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 LILRB4Q8NHJ6 448 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 RDH11Q8TC12 318 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 MAGEE2Q8TD90 523 aaPredicted RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 SLC9A7Q96T83 725 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 ULBP1Q9BZM6 244 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 HOXD1Q9GZZ0 328 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 EFCAB1Q9HAE3 211 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 EXD2Q9NVH0 621 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 IPO11Q9UI26 975 aaKnown RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 UGT2A1Q9Y4X1 527 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 ANKRD12Q6UB98 2062 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 DOCK3Q8IZD9 2030 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 TRIM64BA6NI03 449 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 A8MV72 311 aaPredicted RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 ZNF701M0R085 212 aaPredicted RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 SHMT2P34897 504 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 ZFP36L2P47974 494 aaKnown RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 PLA2G16P53816 162 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 MAP3K7CLP57077 242 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 COPZ1P61923 177 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 MAPRE1Q15691 268 aaKnown RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 LRIT3Q3SXY7 679 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 SLC36A3Q495N2 470 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 NOMO2Q5JPE7 1267 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 WSCD1Q658N2 575 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 IQSEC1Q6DN90 963 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 SPATC1Q76KD6 591 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 MMAAQ8IVH4 418 aaKnown RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 FAM9CQ8IZT9 166 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 ADAMTS16Q8TE57 1224 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 HEXDCQ8WVB3 486 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 TBC1D20Q96BZ9 403 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 C3orf30Q96M34 536 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 ZNF641Q96N77 438 aaPredicted RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 TASP1Q9H6P5 420 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 MEAF6Q9HAF1 191 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 CACNA2D2Q9NY47 1150 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 KLHL8Q9P2G9 620 aaPredicted RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 ZNF229Q9UJW7 825 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 RUVBL2Q9Y230 463 aaKnown RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 PCDHGA11Q9Y5H2 935 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 ATP6AP2A0A1C7CYW4 349 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 MYBPHLA2RUH7 354 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 BCAS1O75363 584 aaPredicted RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 ATP6AP2O75787 350 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 ALDOCP09972 364 aaKnown RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 MTHFD1P11586 935 aaKnown RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 BMP4P12644 408 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 HNRNPLP14866 589 aaKnown RBP eCLIP8.35□□□□□ -1.071e-7■■□□□ 12
VAPB-205ENST00000476395 ITGB6P18564 788 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 POLD2P49005 469 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 CXCR3P49682 368 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 TKTL1P51854 596 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 SIM2Q14190 667 aaPredicted RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 GEN1Q17RS7 908 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 PAGE2BQ5JRK9 111 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 TBCELQ5QJ74 424 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 MANEALQ5VSG8 457 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 AGAP7PQ5VUJ5 663 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 ANKRD34AQ69YU3 496 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 CD300LGQ6UXG3 332 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 ZNF420Q8TAQ5 688 aaPredicted RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 ELMO1Q92556 727 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 CELF6Q96J87 481 aaKnown RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 EGLN2Q96KS0 407 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 TSGA13Q96PP4 275 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 PKMYT1Q99640 499 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 ANKMY1Q9P2S6 941 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 SLC30A1Q9Y6M5 507 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 A0A1B0GTL3 188 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 C2orf81A6NN90 581 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 CLDN25C9JDP6 229 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 H0Y858 1186 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 TEX28O15482 410 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 MAFKO60675 156 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 H2AFYO75367 372 aaKnown RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 USP17L7P0C7H9 530 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 HTR1BP28222 390 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 SLC7A1P30825 629 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 TAS2R39P59534 338 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 CCNA1P78396 465 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 POLD3Q15054 466 aaPredicted RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 SLC14A2Q15849 920 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 IMPG1Q17R60 797 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 TECRLQ5HYJ1 363 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 OTUD3Q5T2D3 398 aaPredicted RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 AFMIDQ63HM1 303 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 USP50Q70EL3 339 aaPredicted RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 ITIH5Q86UX2 942 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 GALNT13Q8IUC8 556 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 PHYKPLQ8IUZ5 450 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 C2CD4AQ8NCU7 369 aaPredicted RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 BEST2Q8NFU1 509 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms