RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 MICAL3Q7RTP6 2002 aa6.86□□□□□ -1.31
UBR4-212ENST00000475973 KAT6AQ92794 2004 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 A0A0J9YVX5 310 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 A0A1B0GTW7 788 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 TCRBV5S2A0A599 114 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 FAM86C2PA6NEL3 165 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 KCNU1A8MYU2 1149 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 PRR33A8MZF0 331 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 PSMD12O00232 456 aaPredicted RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 UBFD1O14562 309 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 LINC01565O15544 149 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 PHGDHO43175 533 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 AKAP10O43572 662 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 ANXA9O76027 345 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 JCHAINP01591 159 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 SNRPB2P08579 225 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 RBP1P09455 135 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 PDGFRBP09619 1106 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 JUNBP17275 347 aaPredicted RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 HOXB8P17481 243 aaPredicted RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 CD9P21926 228 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 LTBRP36941 435 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 SLC1A2P43004 574 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 LHX1P48742 406 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 ALDH7A1P49419 539 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 KPNA2P52292 529 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 GEMP55040 296 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 PKNOX1P55347 436 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 TPI1P60174 286 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 PSMA6P60900 246 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 ATP6V0D1P61421 351 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 MPP1Q00013 466 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 CLN3Q13286 438 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 ADAM15Q13444 863 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 CAMK1Q14012 370 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 IHHQ14623 411 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 ATP6AP1Q15904 470 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 DUSP6Q16828 381 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 ARL13BQ3SXY8 428 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 SLC36A3Q495N2 470 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 ZBED5Q49AG3 693 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 LRRC23Q53EV4 343 aaPredicted RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 UNC50Q53HI1 259 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 GLRA4Q5JXX5 417 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 CLLU1OSQ5K130 101 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 SAMD4BQ5PRF9 694 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 TBCELQ5QJ74 424 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 C6orf52Q5T4I8 152 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 OGFOD2Q6N063 350 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 PRMT9Q6P2P2 845 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 TMEM207Q6UWW9 146 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 CD300LGQ6UXG3 332 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 GPRIN1Q7Z2K8 1008 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 MRPL10Q7Z7H8 261 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 RBM23Q86U06 439 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 ISCA2Q86U28 154 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 FAM35AQ86V20 835 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 EPHX4Q8IUS5 362 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 CROCCP3Q8IVE0 287 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 SLC41A1Q8IVJ1 513 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 SLC22A9Q8IVM8 553 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 CCNYQ8ND76 341 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 RHEBL1Q8TAI7 183 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 ZNF420Q8TAQ5 688 aaPredicted RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 CASP10Q92851 521 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 FAM122AQ96E09 287 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 MOCOSQ96EN8 888 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 SGF29Q96ES7 293 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 FEM1CQ96JP0 617 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 MSLNLQ96KJ4 702 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 C1orf74Q96LT6 269 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 MYRFLQ96LU7 910 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 ASB16Q96NS5 453 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 NPAS2Q99743 824 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 TBL1YQ9BQ87 522 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 LRFN3Q9BTN0 628 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 TDRD1Q9BXT4 1180 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 MRPL1Q9BYD6 325 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 SAP130Q9H0E3 1048 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 CWH43Q9H720 699 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 CLK4Q9HAZ1 481 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 PREBQ9HCU5 417 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 SPAG4Q9NPE6 437 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 SDR39U1Q9NRG7 319 aaPredicted RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 AGPAT4Q9NRZ5 378 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 FAM105AQ9NUU6 356 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 ACTR3BQ9P1U1 418 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 RSL24D1Q9UHA3 163 aaKnown RBP6.85□□□□□ -1.31
UBR4-212ENST00000475973 FBXO5Q9UKT4 447 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 CDH9Q9ULB4 789 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 ZNF510Q9Y2H8 683 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 VWA7Q9Y334 891 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 PCDHA9Q9Y5H5 950 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 PTPRSQ13332 1948 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 PATJQ8NI35 1801 aa6.85□□□□□ -1.31
UBR4-212ENST00000475973 ZNF638Q14966 1978 aaKnown RBP6.84□□□□□ -1.31
UBR4-212ENST00000475973 LOC285095A0A1B0GVY8 99 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 SH3PXD2BA1X283 911 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 HEATR9A2RTY3 570 aa6.84□□□□□ -1.31
UBR4-212ENST00000475973 SOBPA7XYQ1 873 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms