RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SPINT3P49223 89 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 EPHB1P54762 984 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 RPL26P61254 145 aaKnown RBP6.96□□□□□ -1.3
HDAC3-207ENST00000475549 IFI35P80217 286 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-207ENST00000475549 ADCY2Q08462 1091 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 LRP8Q14114 963 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 CLPPQ16740 277 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-207ENST00000475549 MAP9Q49MG5 647 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-207ENST00000475549 SLC9A4Q6AI14 798 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 TIGD7Q6NT04 549 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-207ENST00000475549 NPNTQ6UXI9 565 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 H2AFVQ71UI9 128 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 CHST15Q7LFX5 561 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-207ENST00000475549 LYSMD3Q7Z3D4 306 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 KDELC2Q7Z4H8 507 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 ARHGAP22Q7Z5H3 698 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 MAP7D3Q8IWC1 876 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 CCDC13Q8IYE1 715 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 NRSN1Q8IZ57 195 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 CCNYQ8ND76 341 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 GPR26Q8NDV2 337 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 OR8K1Q8NGG5 319 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 NKD1Q969G9 470 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 HDAC11Q96DB2 347 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 SGF29Q96ES7 293 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 IMP4Q96G21 291 aaKnown RBP6.96□□□□□ -1.3
HDAC3-207ENST00000475549 OLFM3Q96PB7 478 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 TAAR9Q96RI9 348 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 B3GNT4Q9C0J1 378 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 FAM83DQ9H4H8 585 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 ARFGAP3Q9NP61 516 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 PRDM8Q9NQV8 689 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 SPTLC3Q9NUV7 552 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 WDR70Q9NW82 654 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 KCNK4Q9NYG8 393 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 SCHIP1Q9P0W5 487 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-207ENST00000475549 UVRAGQ9P2Y5 699 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 ATXN10Q9UBB4 475 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 SAE1Q9UBE0 346 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-207ENST00000475549 SLC23A2Q9UGH3 650 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 AMACRQ9UHK6 382 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 TMPRSS11EQ9UL52 423 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 RPL26L1Q9UNX3 145 aaKnown RBP6.96□□□□□ -1.3
HDAC3-207ENST00000475549 HYOU1Q9Y4L1 999 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 TTLL3Q9Y4R7 772 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 PCDHGA4Q9Y5G9 962 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 PCDHGA3Q9Y5H0 932 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 B3GALT1Q9Y5Z6 326 aa6.96□□□□□ -1.3
HDAC3-207ENST00000475549 BSNQ9UPA5 3926 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 SSU72P8A0A1W2PR75 194 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 LRRD1A4D1F6 860 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 PRR19A6NJB7 356 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 J3QKU1 62 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 HGSO14964 777 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-207ENST00000475549 NUAK1O60285 661 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 MTA2O94776 668 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 ASMTLO95671 621 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 MT-CYBP00156 380 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-207ENST00000475549 ITGB2P05107 769 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 KRT7P08729 469 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 FAM87AP0C7U9 286 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 PIRTP0C851 137 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 ZNF8P17098 575 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-207ENST00000475549 MX2P20592 715 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 NFKBIAP25963 317 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 CD68P34810 354 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-207ENST00000475549 CA5AP35218 305 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 UGT1A3P35503 534 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 NOP2P46087 812 aaKnown RBP6.95□□□□□ -1.3
HDAC3-207ENST00000475549 GALNT3Q14435 633 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 MESDQ14696 234 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 CLCA4Q14CN2 919 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 TBR1Q16650 682 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 KHDC1Q4VXA5 237 aaKnown RBP6.95□□□□□ -1.3
HDAC3-207ENST00000475549 ANKS6Q68DC2 871 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 TMEM71Q6P5X7 295 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 TMC3Q7Z5M5 1100 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 GALNT13Q8IUC8 556 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 ZNF547Q8IVP9 402 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 RAVER1Q8IY67 606 aaKnown RBP6.95□□□□□ -1.3
HDAC3-207ENST00000475549 NDUFAF2Q8N183 169 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 SPATA22Q8NHS9 363 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 CTNNBL1Q8WYA6 563 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-207ENST00000475549 ART4Q93070 314 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 IQCDQ96DY2 449 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 CTRCQ99895 268 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 MLPHQ9BV36 600 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-207ENST00000475549 SLC12A9Q9BXP2 914 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 MFRPQ9BY79 579 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 CDH19Q9H159 772 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 NHEJ1Q9H9Q4 299 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-207ENST00000475549 ZFYVE1Q9HBF4 777 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 OGFRQ9NZT2 677 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 VPS18Q9P253 973 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 SHOC2Q9UQ13 582 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 KCNK6Q9Y257 313 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 HEY1Q9Y5J3 304 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 SPO11Q9Y5K1 396 aa6.95□□□□□ -1.3
HDAC3-207ENST00000475549 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms