RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SEC13P55735 322 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 PDAP1Q13442 181 aaKnown RBP13.65□□□□□ -0.22
TRAF4-210ENST00000475329 CAMK2GQ13555 558 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-210ENST00000475329 ITGA9Q13797 1035 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 FAM46CQ5VWP2 391 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 LRRC8EQ6NSJ5 796 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 KLC3Q6P597 504 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 FBXL19Q6PCT2 694 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 SERPINA9Q86WD7 417 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 NUDCD3Q8IVD9 361 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 MMAAQ8IVH4 418 aaKnown RBP13.65□□□□□ -0.22
TRAF4-210ENST00000475329 RBFAQ8N0V3 343 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 SLC44A3Q8N4M1 653 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 RAB3IL1Q8TBN0 382 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 RDH11Q8TC12 318 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 SCYL1Q96KG9 808 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 CDX2Q99626 313 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-210ENST00000475329 CDH19Q9H159 772 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 NMRAL1Q9HBL8 299 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 FGFR1OP2Q9NVK5 253 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 TAS2R13Q9NYV9 303 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 SIRPGQ9P1W8 387 aa13.65□□□□□ -0.22
TRAF4-210ENST00000475329 RUVBL2Q9Y230 463 aaKnown RBP13.65□□□□□ -0.22
TRAF4-210ENST00000475329 C5orf42Q9H799 3197 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 RGSL1A5PLK6 1076 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 GOLGA8CPA6NN73 597 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 H0Y858 1186 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 PSMD11O00231 422 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 PRMT5O14744 637 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-210ENST00000475329 KLF11O14901 512 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 OR1I1O60431 355 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 RNASEH1O60930 286 aaKnown RBP13.64□□□□□ -0.23
TRAF4-210ENST00000475329 VPS26AO75436 327 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 WISP3O95389 354 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-210ENST00000475329 PYGLP06737 847 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 LTA4HP09960 611 aaKnown RBP13.64□□□□□ -0.23
TRAF4-210ENST00000475329 ELFN1P0C7U0 828 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 ADRB3P13945 408 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 CPA3P15088 417 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 FOSL2P15408 326 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 ZNF7P17097 686 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-210ENST00000475329 RPS3P23396 243 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAF4-210ENST00000475329 TIE1P35590 1138 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 WASP42768 502 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 KIR2DL1P43626 348 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-210ENST00000475329 METAP1P53582 386 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 ITIH4Q14624 930 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 PCLAFQ15004 111 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 PON2Q15165 354 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 FAM83EQ2M2I3 478 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 CTSL3PQ5NE16 218 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 AGAP9Q5VTM2 703 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 TXNDC11Q6PKC3 985 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 ERN2Q76MJ5 926 aaKnown RBP13.64□□□□□ -0.23
TRAF4-210ENST00000475329 HSD11B1LQ7Z5J1 315 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 PIM3Q86V86 326 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 NXPE1Q8N323 547 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 KCNV2Q8TDN2 545 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 SREK1Q8WXA9 508 aaKnown RBP13.64□□□□□ -0.23
TRAF4-210ENST00000475329 EZH1Q92800 747 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-210ENST00000475329 HLA-CQ95604 372 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 NXNL1Q96CM4 212 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 BIRC8Q96P09 236 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 MECRQ9BV79 373 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 HDAC8Q9BY41 377 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 CLPBQ9H078 707 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 RSPH9Q9H1X1 276 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-210ENST00000475329 P2RY12Q9H244 342 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 HEBP1Q9NRV9 189 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 IGSF5Q9NSI5 407 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 COPG2Q9UBF2 871 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 GNPTGQ9UJJ9 305 aa13.64□□□□□ -0.23
TRAF4-210ENST00000475329 ANTXRLA6NF34 631 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 AGAP14A8MT82 685 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 H3BMM5 538 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 SPINT1O43278 529 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 SYNCRIPO60506 623 aaKnown RBP13.63□□□□□ -0.23
TRAF4-210ENST00000475329 DNAJC6O75061 913 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 ADH1BP00325 375 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 EGFP01133 1207 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 CCDC166P0CW27 439 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 MYL2P10916 166 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 UGT1A6P19224 532 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 DRD1P21728 446 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 CD9P21926 228 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 UGT1A1P22309 533 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 UGT1A4P22310 534 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 ALDH3A1P30838 453 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 NTSR1P30989 418 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 UGT1A3P35503 534 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 UGT1A5P35504 534 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 TIAL1Q01085 375 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAF4-210ENST00000475329 PFKPQ01813 784 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 GRSF1Q12849 480 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAF4-210ENST00000475329 DLG1Q12959 904 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 CSHL1Q14406 222 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 STARD3Q14849 445 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 ACOX1Q15067 660 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 CHI3L2Q15782 390 aa13.63□□□□□ -0.23
TRAF4-210ENST00000475329 SMAD2Q15796 467 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms