RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TARM1B6A8C7 271 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 CCL22O00626 93 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 COPEO14579 308 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 KLF11O14901 512 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 BIRC5O15392 142 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 SPAG7O75391 227 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 SRP72O76094 671 aaKnown RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 IL1BP01584 269 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 C1SP09871 688 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 SLC35E2BP0CK96 405 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 SRFP11831 508 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 GM2AP17900 193 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 FDXRP22570 491 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 RPS3P23396 243 aaKnown RBP eCLIP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 TYK2P29597 1187 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 NTSR1P30989 418 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 MC4RP32245 332 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 SPAM1P38567 509 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 PTGER3P43115 390 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 SOX9P48436 509 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 MMP16P51512 607 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 RAB10P61026 200 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 MRPS21P82921 87 aaKnown RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 GUCY1A3Q02108 690 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 NFATC2Q13469 925 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 ITIH4Q14624 930 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 USP10Q14694 798 aaKnown RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 AGERQ15109 404 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 PDK4Q16654 411 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 FBXO43Q4G163 708 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 TMEM52BQ4KMG9 183 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 SETMARQ53H47 684 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 FASTKD1Q53R41 847 aaKnown RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 PPM1JQ5JR12 505 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 HENMT1Q5T8I9 393 aaKnown RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 FAM46CQ5VWP2 391 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 LRRC66Q68CR7 880 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 PTCRAQ6ISU1 281 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 PSAPL1Q6NUJ1 521 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 SERPINA13PQ6UXR4 307 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 LIPIQ6XZB0 460 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 ZNF765Q7L2R6 523 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 CEP97Q8IW35 865 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 GPR26Q8NDV2 337 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 TTC8Q8TAM2 541 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 RAB3IL1Q8TBN0 382 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 PIP4K2CQ8TBX8 421 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 ARRDC3Q96B67 414 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 PDLIM5Q96HC4 596 aaKnown RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 MAGEB18Q96M61 343 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 COQ10AQ96MF6 247 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 BIRC8Q96P09 236 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 NECAB3Q96P71 396 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 ACOX2Q99424 681 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 KLF6Q99612 283 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 OLFM1Q99784 485 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 SELENOSQ9BQE4 189 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 AARSD1Q9BTE6 412 aaKnown RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 EPN3Q9H201 632 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 KCNK9Q9NPC2 374 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 FBXO6Q9NRD1 293 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 LATS2Q9NRM7 1088 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 NKIRAS1Q9NYS0 192 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.58□□□□□ -1.36
ATG4A-207ENST00000474825 SIRPGQ9P1W8 387 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 KLHL42Q9P2K6 505 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 LIMD1Q9UGP4 676 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 VWA7Q9Y334 891 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 MYLKQ15746 1914 aa6.58□□□□□ -1.36
ATG4A-207ENST00000474825 MIA3Q5JRA6 1907 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 A0A087X1B8 175 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 A0A096LPK6 155 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 GLYATL1P3A0A0U1RQE8 302 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 A0A0U1RQS6 177 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 GMNCA6NCL1 334 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 C1QTNF3-AMACRE9PGA6 284 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 GOLGA8RI6L899 631 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PFDN6O15212 129 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PLIN3O60664 434 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ADAM23O75077 832 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ESR1P03372 595 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PROCP04070 461 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 SBK3P0C264 359 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PRSS56P0CW18 603 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 HLA-EP13747 358 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ADRB3P13945 408 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PKMP14618 531 aaKnown RBP6.57□□□□□ -1.36
ATG4A-207ENST00000474825 STMN1P16949 149 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 TAC1P20366 129 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 C5AR1P21730 350 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 ACRV1P26436 265 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 CA5AP35218 305 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 DRD3P35462 400 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 PPARGP37231 505 aaPredicted RBP6.57□□□□□ -1.36
ATG4A-207ENST00000474825 P2RY2P41231 377 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 CDKN1CP49918 316 aaPredicted RBP6.57□□□□□ -1.36
ATG4A-207ENST00000474825 COPAP53621 1224 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 GNGT1P63211 74 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 TMPRSS15P98073 1019 aa6.57□□□□□ -1.36
ATG4A-207ENST00000474825 IL9RQ01113 521 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms