RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ZPBPQ9BS86 351 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 SYT11Q9BT88 431 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 RIOK2Q9BVS4 552 aaKnown RBP13.88□□□□□ -0.19
CCDC78-209ENST00000474647 PCYT1BQ9Y5K3 369 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-209ENST00000474647 MRPS18BQ9Y676 258 aaKnown RBP13.88□□□□□ -0.19
CCDC78-209ENST00000474647 NBPF19A0A087WUL8 3843 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 USP9XQ93008 2570 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-209ENST00000474647 SPTBN1Q01082 2364 aaKnown RBP13.87□□□□□ -0.19
CCDC78-209ENST00000474647 A0A0J9YYE9 177 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 LRRC53A6NM62 1247 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 POLR1CO15160 346 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-209ENST00000474647 TRBC1P01850 177 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 FTLP02792 175 aaPredicted RBP13.87□□□□□ -0.19
CCDC78-209ENST00000474647 NTRK1P04629 796 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 GP1BBP13224 206 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 ATP1A3P13637 1013 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 ZNF30P17039 623 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 IL1R2P27930 398 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 MC1RQ01726 317 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 PTSQ03393 145 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 FOXM1Q08050 763 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 ZNF765Q7L2R6 523 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 ARHGAP22Q7Z5H3 698 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 POLNQ7Z5Q5 900 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 COX14Q96I36 57 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 POLR1EQ9GZS1 481 aaKnown RBP13.87□□□□□ -0.19
CCDC78-209ENST00000474647 TRIT1Q9H3H1 467 aaKnown RBP13.87□□□□□ -0.19
CCDC78-209ENST00000474647 HAUS4Q9H6D7 363 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 SARS2Q9NP81 518 aaKnown RBP13.87□□□□□ -0.19
CCDC78-209ENST00000474647 FBXO8Q9NRD0 319 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 ANO10Q9NW15 660 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 PDP2Q9P2J9 529 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 TBC1D29Q9UFV1 150 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 PLAAQ9Y263 795 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 TP53TG5Q9Y2B4 290 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 PPIL1Q9Y3C6 166 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 OAS3Q9Y6K5 1087 aaKnown RBP13.87□□□□□ -0.19
CCDC78-209ENST00000474647 SPTAN1Q13813 2472 aaKnown RBP13.87□□□□□ -0.19
CCDC78-209ENST00000474647 ICE1Q9Y2F5 2266 aa13.87□□□□□ -0.19
CCDC78-209ENST00000474647 PRR19A6NJB7 356 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 DNAJC6O75061 913 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 CLDN7O95471 211 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 RARAP10276 462 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 SLC2A4P14672 509 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 NR1D1P20393 614 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 STAT5AP42229 794 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 STC1P52823 247 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 DSC2Q02487 901 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 KRT81Q14533 505 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 SLC9B2Q86UD5 537 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 SH3KBP1Q96B97 665 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 TBC1D10AQ9BXI6 508 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 ULBP3Q9BZM4 244 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 SPRY4Q9C004 299 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 MRPL47Q9HD33 250 aaKnown RBP13.86□□□□□ -0.19
CCDC78-209ENST00000474647 CHKBQ9Y259 395 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 TMEM184BQ9Y519 407 aaPredicted RBP13.86□□□□□ -0.19
CCDC78-209ENST00000474647 RPS6KL1Q9Y6S9 549 aa13.86□□□□□ -0.19
CCDC78-209ENST00000474647 C1orf232A0A0U1RR37 186 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 MFSD11O43934 449 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 FZD6O60353 706 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 DLGAP3O95886 979 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 F3P13726 295 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 PCK1P35558 622 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 DLSTP36957 453 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 EPHA4P54764 986 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 GFERP55789 205 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 KLRB1Q12918 225 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 BOLA3Q53S33 107 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 TXNRD3NBQ6F5E7 133 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 IYDQ6PHW0 289 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 APTXQ7Z2E3 356 aaKnown RBP13.85□□□□□ -0.19
CCDC78-209ENST00000474647 ZNF571Q7Z3V5 609 aaPredicted RBP13.85□□□□□ -0.19
CCDC78-209ENST00000474647 PHYKPLQ8IUZ5 450 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 LURAP1LQ8IV03 231 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 ESX1Q8N693 406 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 LPCAT1Q8NF37 534 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 TRIM11Q96F44 468 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 HERPUD2Q9BSE4 406 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 TDRD1Q9BXT4 1180 aaKnown RBP13.85□□□□□ -0.19
CCDC78-209ENST00000474647 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.85□□□□□ -0.19
CCDC78-209ENST00000474647 OSGEPL1Q9H4B0 414 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 PCDH18Q9HCL0 1135 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 ARFGAP3Q9NP61 516 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 VPS18Q9P253 973 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 DNPEPQ9ULA0 475 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 MYO6Q9UM54 1294 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 MAN2B2Q9Y2E5 1009 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 PCDHB3Q9Y5E6 796 aa13.85□□□□□ -0.19
CCDC78-209ENST00000474647 MED13Q9UHV7 2174 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 FADS2P1A8MWK0 482 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 MTSS1O43312 755 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 GZMAP12544 262 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 ZNF28P17035 718 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 CA4P22748 312 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 MMRN1Q13201 1228 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 ERV3-1Q14264 604 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 PLA2G4EQ3MJ16 856 aa13.84□□□□□ -0.19
CCDC78-209ENST00000474647 E4F1Q66K89 784 aaPredicted RBP13.84□□□□□ -0.19
CCDC78-209ENST00000474647 LYSMD3Q7Z3D4 306 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms