RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 PIWIL4Q7Z3Z4 852 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CMC1Q7Z7K0 106 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SDCCAG8Q86SQ7 713 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CLEC14AQ86T13 490 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 ZC3HC1Q86WB0 502 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SLC22A9Q8IVM8 553 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 MFN1Q8IWA4 741 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CNTN4Q8IWV2 1026 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 UNC5BQ8IZJ1 945 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 GPATCH11Q8N954 259 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 NETO2Q8NC67 525 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 TMEM52Q8NDY8 209 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SCAMP5Q8TAC9 235 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 PDCD6IPQ8WUM4 868 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 DNAJC9Q8WXX5 260 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CASP10Q92851 521 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 PABPC5Q96DU9 382 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 MFSD3Q96ES6 412 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SPATA17Q96L03 361 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 RPRD1AQ96P16 312 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 FCRL3Q96P31 734 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SEPT5Q99719 369 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 MRPL57Q9BQC6 102 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 PAAF1Q9BRP4 392 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 TMEM175Q9BSA9 504 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CCDC28BQ9BUN5 200 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SLC12A9Q9BXP2 914 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SLC39A8Q9C0K1 460 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 POLR1EQ9GZS1 481 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 MRPL46Q9H2W6 279 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 DENND2DQ9H6A0 471 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 NMRK2Q9NPI5 230 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 TCF7L2Q9NQB0 619 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CHRAC1Q9NRG0 131 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 TRMT13Q9NUP7 481 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 TMEM248Q9NWD8 314 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 NCKIPSDQ9NZQ3 722 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 HACD3Q9P035 362 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 TMEM216Q9P0N5 145 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 MARCH2Q9P0N8 246 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 ARMCX1Q9P291 453 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 DNAJB4Q9UDY4 337 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SFMBT1Q9UHJ3 866 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 FBXO5Q9UKT4 447 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 ACSL6Q9UKU0 697 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 CORO1CQ9ULV4 474 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 GABRQQ9UN88 632 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 ARHGAP26Q9UNA1 814 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 RUVBL2Q9Y230 463 aaKnown RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 PRG3Q9Y2Y8 225 aaPredicted RBP5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 L3MBTL1Q9Y468 752 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 SNX10Q9Y5X0 201 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 NR2E3Q9Y5X4 410 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 HS3ST4Q9Y661 456 aa5.9□□□□□ -1.46
ATPAF1-204ENST00000474020 TRPM7Q96QT4 1865 aa5.9□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC12A8A0AV02 714 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 TYW5A2RUC4 315 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 A8MUI8 341 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 CAPN14A8MX76 684 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 PRR5-ARHGAP8B1AHC4 643 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 H0Y3Z8 333 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 HDAC3O15379 428 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC7A4O43246 635 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 NPHS1O60500 1241 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 MAFKO60675 156 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 SMIM24O75264 130 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 LYPLA1O75608 230 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 PARNO95453 639 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 CRTAMO95727 393 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 FGF1P05230 155 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 HLA-DQB2P05538 268 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 RPSAP08865 295 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 GSTM1P09488 218 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 LTA4HP09960 611 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 TPBGLP0DKB5 382 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 ACADSP16219 412 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 PRKCAP17252 672 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 HLA-DPA1P20036 260 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 ATP5F1P24539 256 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC26A3P40879 764 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 CPA2P48052 419 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 TUFMP49411 452 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 RABGGTBP53611 331 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 PRMT2P55345 433 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 ARPP19P56211 112 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 SESN3P58005 492 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 NAA20P61599 178 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 YBX1P67809 324 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 ARHGAP8P85298 464 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 IL10RBQ08334 325 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 MSLNQ13421 630 aaPredicted RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 GRM3Q14832 879 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 KIR3DS1Q14943 382 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 KPNB1Q14974 876 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 VEPH1Q14D04 833 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 SMAD1Q15797 465 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 PSMD5Q16401 504 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 TRIM71Q2Q1W2 868 aaKnown RBP5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 CMPK2Q5EBM0 449 aa5.89□□□□□ -1.47
ATPAF1-204ENST00000474020 FAM171A1Q5VUB5 890 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms