RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SFRP1Q8N474 314 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 PRR7Q8TB68 274 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 PIH1D2Q8WWB5 315 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 AHCYL2Q96HN2 611 aaKnown RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 WDR24Q96S15 920 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 SYT11Q9BT88 431 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 SNRNP25Q9BV90 132 aaKnown RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 CINPQ9BW66 212 aaPredicted RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 SLC29A3Q9BZD2 475 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 ZNF768Q9H5H4 540 aaKnown RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 FBXO8Q9NRD0 319 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 CWC15Q9P013 229 aaKnown RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 MAP10Q9P2G4 905 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 PCSK1NQ9UHG2 260 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 CNOT6Q9ULM6 557 aaKnown RBP9.26□□□□□ -0.93
VCL-204ENST00000472585 AP4E1Q9UPM8 1137 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 POLHQ9Y253 713 aa9.26□□□□□ -0.93
VCL-204ENST00000472585 A6NCN8 305 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 DNAJC6O75061 913 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 STK17BO94768 372 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 MAP3K6O95382 1288 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 CALB1P05937 261 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 TCF4P15884 667 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 TEAD1P28347 426 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 ERCC5P28715 1186 aaPredicted RBP9.25□□□□□ -0.93
VCL-204ENST00000472585 MAXP61244 160 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 AP1S1P61966 158 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 DPTQ07507 201 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 MAMLD1Q13495 774 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 PEX6Q13608 980 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 DPYSQ14117 519 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 ERV3-1Q14264 604 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 LBRQ14739 615 aaKnown RBP9.25□□□□□ -0.93
VCL-204ENST00000472585 KRT31Q15323 416 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 RAET1GQ6H3X3 334 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 DNAJC24Q6P3W2 148 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 WDR74Q6RFH5 385 aaPredicted RBP9.25□□□□□ -0.93
VCL-204ENST00000472585 ESX1Q8N693 406 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 PDCD6IPQ8WUM4 868 aaKnown RBP9.25□□□□□ -0.93
VCL-204ENST00000472585 SCRN2Q96FV2 425 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 COX14Q96I36 57 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 MCCC1Q96RQ3 725 aaPredicted RBP9.25□□□□□ -0.93
VCL-204ENST00000472585 AGPAT1Q99943 283 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 DHX35Q9H5Z1 703 aaKnown RBP9.25□□□□□ -0.93
VCL-204ENST00000472585 SIDT1Q9NXL6 827 aaKnown RBP9.25□□□□□ -0.93
VCL-204ENST00000472585 DONSONQ9NYP3 566 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 OGFRQ9NZT2 677 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 TBC1D29Q9UFV1 150 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 TLK1Q9UKI8 766 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 PPIL1Q9Y3C6 166 aa9.25□□□□□ -0.93
VCL-204ENST00000472585 OAS3Q9Y6K5 1087 aaKnown RBP9.25□□□□□ -0.93
VCL-204ENST00000472585 ZNF106Q9H2Y7 1883 aaKnown RBP9.25□□□□□ -0.93
VCL-204ENST00000472585 APCP25054 2843 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 FZD6O60353 706 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 MAFKO60675 156 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 KATNA1O75449 491 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 PGLSO95336 258 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 CPP00450 1065 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 ATP1A1P05023 1023 aaKnown RBP9.24□□□□□ -0.93
VCL-204ENST00000472585 IL1R2P27930 398 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 MIPP30301 263 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 HTR7P34969 479 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 STAT5AP42229 794 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 AIF1P55008 147 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 GPLD1P80108 840 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 NFATC2Q13469 925 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 RFTN1Q14699 578 aaPredicted RBP9.24□□□□□ -0.93
VCL-204ENST00000472585 ERMARDQ5T6L9 678 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 CDKAL1Q5VV42 579 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 C1QL3Q5VWW1 255 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 ACAD10Q6JQN1 1059 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 IYDQ6PHW0 289 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 ADAMTSL4Q6UY14 1074 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 IRF2BP2Q7Z5L9 587 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 NCSTNQ92542 709 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 OR2M4Q96R27 311 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 NUDCD1Q96RS6 583 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 SLC38A3Q99624 504 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 TBC1D10AQ9BXI6 508 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 CLSTN2Q9H4D0 955 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 AKIRIN1Q9H9L7 192 aaPredicted RBP9.24□□□□□ -0.93
VCL-204ENST00000472585 SP110Q9HB58 689 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 SCHIP1Q9P0W5 487 aaPredicted RBP9.24□□□□□ -0.93
VCL-204ENST00000472585 KLHL3Q9UH77 587 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 PHTF1Q9UMS5 762 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 MAP4K5Q9Y4K4 846 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 RPS6KL1Q9Y6S9 549 aa9.24□□□□□ -0.93
VCL-204ENST00000472585 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.23□□□□□ -0.93
VCL-204ENST00000472585 CDC14CA4D256 554 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 GOLGA6CA6NDK9 693 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 GOLGA6BA6NDN3 693 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 TMEM191CA6NGB0 347 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 POLR1CO15160 346 aaPredicted RBP9.23□□□□□ -0.93
VCL-204ENST00000472585 DNAJB5O75953 348 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 PRLP01236 227 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 GOLGA6DP0CG33 693 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 AMPD1P23109 780 aa9.23□□□□□ -0.93
VCL-204ENST00000472585 VARSP26640 1264 aaKnown RBP9.23□□□□□ -0.93
VCL-204ENST00000472585 EEF1GP26641 437 aaKnown RBP9.23□□□□□ -0.93
VCL-204ENST00000472585 DLSTP36957 453 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms