RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	DACH2	Q96NX9	599 aa		3.82	□□□□□ -1.8
PTCD3-209	ENST00000472044	FIZ1	Q96SL8	496 aa		3.82	□□□□□ -1.8
PTCD3-209	ENST00000472044	ANKEF1	Q9NU02	776 aa		3.82	□□□□□ -1.8
PTCD3-209	ENST00000472044	GIMAP4	Q9NUV9	329 aa		3.82	□□□□□ -1.8
PTCD3-209	ENST00000472044	MCM9	Q9NXL9	1143 aa		3.82	□□□□□ -1.8
PTCD3-209	ENST00000472044	MAP2K7	O14733	419 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	KCNN4	O15554	427 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	TIMM44	O43615	452 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	ENTPD3	O75355	529 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	ERAL1	O75616	437 aa	Known RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	CSPG5	O95196	566 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	STARD3NL	O95772	234 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	EGF	P01133	1207 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	TUBB	P07437	444 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	PRSS2	P07478	247 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	AKR1B1	P15121	316 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	ZNF12	P17014	697 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	UGT1A1	P22309	533 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	HOXA11	P31270	313 aa	Predicted RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	EIF2D	P41214	584 aa	Known RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	MMP14	P50281	582 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	CLCNKA	P51800	687 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	POLG	P54098	1239 aa	Predicted RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	SEC61A1	P61619	476 aa	Known RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	IFI35	P80217	286 aa	Predicted RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	NUCB1	Q02818	461 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	KRTAP1-1	Q07627	177 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	SPOCK1	Q08629	439 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	MAD2L1	Q13257	205 aa	Predicted RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	DHX34	Q14147	1143 aa	Known RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	BECN1	Q14457	450 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	PLCB4	Q15147	1175 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	HLF	Q16534	295 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	NTRK2	Q16620	822 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	C15orf59	Q2T9L4	293 aa	Predicted RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	XKR9	Q5GH70	373 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	PAPPA-AS1	Q5QFB9	102 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	KRT79	Q5XKE5	535 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	BRAT1	Q6PJG6	821 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	KRT74	Q7RTS7	529 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	FJX1	Q86VR8	437 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	ARID3B	Q8IVW6	561 aa	Predicted RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	PCDH20	Q8N6Y1	951 aa	Known RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	LSMEM1	Q8N8F7	131 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	IL17RC	Q8NAC3	791 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	ZNF114	Q8NC26	417 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	OR1J2	Q8NGS2	313 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	THAP6	Q8TBB0	222 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	RHBDF1	Q96CC6	855 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	NUDCD1	Q96RS6	583 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	MXD3	Q9BW11	206 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	SEZ6L	Q9BYH1	1024 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	HRH4	Q9H3N8	390 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	PIGM	Q9H3S5	423 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	SEBOX	Q9HB31	216 aa	Predicted RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	PDE7B	Q9NP56	450 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	TRMT1	Q9NXH9	659 aa	Known RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	C1RL	Q9NZP8	487 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	MORF4L1	Q9UBU8	362 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	POLG2	Q9UHN1	485 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	RPS6KA6	Q9UK32	745 aa		3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	TMEM184B	Q9Y519	407 aa	Predicted RBP	3.81	□□□□□ -1.8
PTCD3-209	ENST00000472044	LINC01553	A4QN01	128 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	FAM90A26	D6RGX4	464 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	PROB1	E7EW31	1015 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	CTDSP2	O14595	271 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	ADRB2	P07550	413 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	IL11	P20809	199 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	SAT1	P21673	171 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	SSTR2	P30874	369 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	NNMT	P40261	264 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	NRIP1	P48552	1158 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	HSD17B4	P51659	736 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	KCNC3	Q14003	757 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	NFATC4	Q14934	902 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	SETMAR	Q53H47	684 aa	Predicted RBP	3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	NSUN5P2	Q63ZY6	315 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	TMEM198	Q66K66	360 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	ZNF280D	Q6N043	979 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	PAPD4	Q6PIY7	484 aa	Known RBP	3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	KRBA2	Q6ZNG9	492 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	GLCCI1	Q86VQ1	547 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	OR8H2	Q8N162	312 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	SCML4	Q8N228	414 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	PGBD5	Q8N414	524 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	SLC38A9	Q8NBW4	561 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	HM13	Q8TCT9	377 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	PRPF31	Q8WWY3	499 aa	Known RBP	3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	SLC22A18	Q96BI1	424 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	ORAI1	Q96D31	301 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	SCMH1	Q96GD3	660 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	GAD1	Q99259	594 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	TMEM204	Q9BSN7	226 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	MRPL1	Q9BYD6	325 aa	Known RBP	3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	IL25	Q9H293	177 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	OSGEPL1	Q9H4B0	414 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	NOX4	Q9NPH5	578 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	PAG1	Q9NWQ8	432 aa		3.8	□□□□□ -1.8
PTCD3-209	ENST00000472044	PSD3	Q9NYI0	1048 aa		3.8	□□□□□ -1.8

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