RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SIDT1Q9NXL6 827 aaKnown RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 GPR83Q9NYM4 423 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 PDP2Q9P2J9 529 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 TRIM10Q9UDY6 481 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 TMEM59LQ9UK28 342 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 MAN1B1Q9UKM7 699 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 RARRES3Q9UL19 164 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 PHTF1Q9UMS5 762 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 SNX7Q9UNH6 387 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 NEU3Q9UQ49 428 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 OSGIN2Q9Y236 505 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 SLC17A4Q9Y2C5 497 aa6.81□□□□□ -1.32
HDAC1-204ENST00000471488 COPG1Q9Y678 874 aaKnown RBP6.81□□□□□ -1.32
HDAC1-204ENST00000471488 FAM237AA0A1B0GTK4 181 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 ANKRD62A6NC57 917 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 NPIPB15A6NHN6 443 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-204ENST00000471488 PDZK1P1A8MUH7 402 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 C21orf140B9A014 251 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 PRAMEF11O60813 436 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 ZG16O60844 167 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 TMEM63AO94886 807 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 UBXN7O94888 489 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 TIAF1O95411 115 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 CBX6O95503 412 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 VIPP01282 170 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 KRT3P12035 628 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 SLC2A4P14672 509 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 PON1P27169 355 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 SCNN1AP37088 669 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 PPP1R2P41236 205 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 GABRB2P47870 512 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 EPHB1P54762 984 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 ITGA1P56199 1179 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 HDAC4P56524 1084 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 NRG1Q02297 640 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-204ENST00000471488 ITKQ08881 620 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 IL11RAQ14626 422 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 PLEKHN1Q494U1 663 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-204ENST00000471488 TDRD12Q587J7 1177 aaKnown RBP6.8□□□□□ -1.32
HDAC1-204ENST00000471488 HSP90AA4PQ58FG1 418 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-204ENST00000471488 LYPLAL1Q5VWZ2 237 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 PWWP2BQ6NUJ5 590 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 ARHGAP36Q6ZRI8 547 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 USP45Q70EL2 814 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 SYVN1Q86TM6 617 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 NOP9Q86U38 636 aaKnown RBP6.8□□□□□ -1.32
HDAC1-204ENST00000471488 TMEM126BQ8IUX1 230 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 PHYKPLQ8IUZ5 450 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 RBMXL3Q8N7X1 1067 aaKnown RBP6.8□□□□□ -1.32
HDAC1-204ENST00000471488 SIDT2Q8NBJ9 832 aaKnown RBP6.8□□□□□ -1.32
HDAC1-204ENST00000471488 SEC14L1Q92503 715 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 PNPLA2Q96AD5 504 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 RANBP9Q96S59 729 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 AGAP2Q99490 1192 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 SLC39A8Q9C0K1 460 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 SLC7A5P2Q9GIP4 190 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 BRD8Q9H0E9 1235 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 RETREG1Q9H6L5 497 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 SARS2Q9NP81 518 aaKnown RBP6.8□□□□□ -1.32
HDAC1-204ENST00000471488 KLC4Q9NSK0 619 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 CPNE7Q9UBL6 633 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 FARSAQ9Y285 508 aaKnown RBP6.8□□□□□ -1.32
HDAC1-204ENST00000471488 DNAJC16Q9Y2G8 782 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 TTLL3Q9Y4R7 772 aa6.8□□□□□ -1.32
HDAC1-204ENST00000471488 PCDHGA9Q9Y5G4 932 aaKnown RBP6.8□□□□□ -1.32
HDAC1-204ENST00000471488 SHANK1Q9Y566 2161 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 PRRC2CQ9Y520 2896 aaKnown RBP6.79□□□□□ -1.32
HDAC1-204ENST00000471488 POLQO75417 2590 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-204ENST00000471488 EEF2KO00418 725 aaKnown RBP6.79□□□□□ -1.32
HDAC1-204ENST00000471488 FGF10O15520 208 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-204ENST00000471488 CCP110O43303 1012 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 SLC4A1P02730 911 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 EBLN1P0CF75 366 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 DESP17661 470 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 GPD1P21695 349 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 LHCGRP22888 699 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 OTX2P32243 289 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 EPHA4P54764 986 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 MAXP61244 160 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 AP1S1P61966 158 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 LRP8Q14114 963 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 LBRQ14739 615 aaKnown RBP6.79□□□□□ -1.32
HDAC1-204ENST00000471488 INSCQ1MX18 579 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 LRRC66Q68CR7 880 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 CYB5D1Q6P9G0 228 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 IYDQ6PHW0 289 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 CRTC3Q6UUV7 619 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 STRADAQ7RTN6 431 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 FJX1Q86VR8 437 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 FMR1NBQ8N0W7 255 aaPredicted RBP6.79□□□□□ -1.32
HDAC1-204ENST00000471488 SLC20A1Q8WUM9 679 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 RSC1A1Q92681 617 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 ZNF653Q96CK0 615 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 ECHDC3Q96DC8 303 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 CXorf40BQ96DE9 158 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 SGSM3Q96HU1 749 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 SMIM14Q96QK8 99 aa6.79□□□□□ -1.32
HDAC1-204ENST00000471488 HERPUD2Q9BSE4 406 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms