RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PSMD11O00231 422 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 SCAMP3O14828 347 aaKnown RBP9.12□□□□□ -0.95
PTPRE-207ENST00000471218 SMAD6O43541 496 aaKnown RBP9.12□□□□□ -0.95
PTPRE-207ENST00000471218 ZNF217O75362 1048 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 AHSGP02765 367 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 SYPP08247 313 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 C7P10643 843 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 PYGBP11216 843 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 CYP2A6P11509 494 aaPredicted RBP9.12□□□□□ -0.95
PTPRE-207ENST00000471218 HNRNPLP14866 589 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPRE-207ENST00000471218 TYK2P29597 1187 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 SLC1A2P43004 574 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 IRX4P78413 519 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 GUCY1A3Q02108 690 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 CACNG1Q06432 222 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 SLC14A1Q13336 389 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 ENPP2Q13822 863 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 GALNT3Q14435 633 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 ELAVL3Q14576 367 aaKnown RBP9.12□□□□□ -0.95
PTPRE-207ENST00000471218 DUOXA1Q1HG43 343 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 ZNF423Q2M1K9 1284 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 GAB4Q2WGN9 574 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 HNRNPA1L2Q32P51 320 aaKnown RBP9.12□□□□□ -0.95
PTPRE-207ENST00000471218 C2orf27AQ580R0 203 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 TRIM61Q5EBN2 209 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 ATXN7L2Q5T6C5 722 aaPredicted RBP9.12□□□□□ -0.95
PTPRE-207ENST00000471218 MROH9Q5TGP6 573 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 ANO7Q6IWH7 933 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 FAM45BPQ6NSW5 357 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 SLC23A3Q6PIS1 610 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 GDPD4Q6W3E5 623 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 CLEC14AQ86T13 490 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 KIRREL3Q8IZU9 778 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 TMIEQ8NEW7 156 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 OR6P1Q8NGX9 317 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 FAM45AQ8TCE6 357 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 PIGKQ92643 395 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 HDAC10Q969S8 669 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 CDKN2AIPNLQ96HQ2 116 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 PPP1R16AQ96I34 528 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 SERAC1Q96JX3 654 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 EXOC2Q96KP1 924 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 ZNF778Q96MU6 729 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 TSNARE1Q96NA8 513 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 ZNF317Q96PQ6 595 aaPredicted RBP9.12□□□□□ -0.95
PTPRE-207ENST00000471218 PLEKHG4BQ96PX9 1271 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 TRIM56Q9BRZ2 755 aaKnown RBP9.12□□□□□ -0.95
PTPRE-207ENST00000471218 TM6SF2Q9BZW4 377 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 IARS2Q9NSE4 1012 aaKnown RBP9.12□□□□□ -0.95
PTPRE-207ENST00000471218 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.12□□□□□ -0.95
PTPRE-207ENST00000471218 KLHL42Q9P2K6 505 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 SUN2Q9UH99 717 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 GGT7Q9UJ14 662 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 TLK1Q9UKI8 766 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 MSRB2Q9Y3D2 182 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 PSAT1Q9Y617 370 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 ATG2BQ96BY7 2078 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 ASPMQ8IZT6 3477 aa9.12□□□□□ -0.95
PTPRE-207ENST00000471218 A0A1W2PPM1 405 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 AGAP14A8MT82 685 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 C1QTNF9BB2RNN3 333 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 K7EQS6 105 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 K7ERQ8 282 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 CDX4O14627 284 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-207ENST00000471218 TPP1O14773 563 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 CD3EAPO15446 510 aaKnown RBP9.11□□□□□ -0.95
PTPRE-207ENST00000471218 S1PR4O95977 384 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 ESR1P03372 595 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 PDHA1P08559 390 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 C1QTNF9P0C862 333 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 STMN1P16949 149 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 RPA3P35244 121 aaPredicted RBP9.11□□□□□ -0.95
PTPRE-207ENST00000471218 P2RY2P41231 377 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 PTGER3P43115 390 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 GYS2P54840 703 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 SLC12A2P55011 1212 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 RAB10P61026 200 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 NAA20P61599 178 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 CCDC15Q0P6D6 951 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 ASPHQ12797 758 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 MPP2Q14168 576 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 PTPRNQ16849 979 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 GEN1Q17RS7 908 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 UAP1L1Q3KQV9 507 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 FASTKD1Q53R41 847 aaKnown RBP9.11□□□□□ -0.95
PTPRE-207ENST00000471218 ZNF805Q5CZA5 627 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 LYSMD4Q5XG99 296 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 TMEM215Q68D42 235 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 TCEAL6Q6IPX3 200 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 SDE2Q6IQ49 451 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 CES3Q6UWW8 571 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 DPY19L3Q6ZPD9 716 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 CAMK1DQ8IU85 385 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 HOMEZQ8IX15 550 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 UNC5BQ8IZJ1 945 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 C4orf33Q8N1A6 199 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPRE-207ENST00000471218 TTC16Q8NEE8 873 aa9.11□□□□□ -0.95
PTPRE-207ENST00000471218 OR4K2Q8NGD2 314 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms