RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SMAD6O43541 496 aaKnown RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 USP12O75317 370 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ALDH1A2O94788 518 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 PGLSO95336 258 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 PRNPP04156 253 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 INHBAP08476 426 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ATXN1LP0C7T5 689 aaKnown RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 HNRNPLP14866 589 aaKnown RBP eCLIP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 DRD1P21728 446 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 PRKCHP24723 683 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 CNTFP26441 200 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SSTR1P30872 391 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 HADHAP40939 763 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 GRIA1P42261 906 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 RGRP47804 291 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 STK19P49842 368 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SERPINB9P50453 376 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SUOXP51687 545 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 CCNHP51946 323 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 STARD6P59095 220 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 GPX6P59796 221 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 FAM193AP78312 1265 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 KDSRQ06136 332 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF844Q08AG5 666 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 CCDC15Q0P6D6 951 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SEPT6Q14141 434 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ELAVL3Q14576 367 aaKnown RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 POU6F1Q14863 301 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 CRYMQ14894 314 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 FASTKD3Q14CZ7 662 aaKnown RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 TAF1AQ15573 450 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 UGP2Q16851 508 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 LONRF1Q17RB8 773 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 KCTD19Q17RG1 926 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SKIDA1Q1XH10 827 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF528Q3MIS6 628 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 KRT71Q3SY84 523 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 HSF5Q4G112 596 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 FBXO43Q4G163 708 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ANKRD20A4Q4UJ75 823 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ATXN7L2Q5T6C5 722 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 AGBL2Q5U5Z8 902 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ZDHHC20Q5W0Z9 365 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 TMEM215Q68D42 235 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ZC3H14Q6PJT7 736 aaKnown RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SERPINA13PQ6UXR4 307 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 GDPD4Q6W3E5 623 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 UNC5AQ6ZN44 842 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 USP45Q70EL2 814 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 C12orf40Q86WS4 652 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 LRRC6Q86X45 466 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SLC25A41Q8N5S1 370 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ZBTB44Q8NCP5 570 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 LPCAT1Q8NF37 534 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 FRS2Q8WU20 508 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 STYXQ8WUJ0 223 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 PDCD6IPQ8WUM4 868 aaKnown RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 OR8D1Q8WZ84 308 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF669Q96BR6 464 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 PGM2Q96G03 612 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 CERS2Q96G23 380 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 PPP1R16AQ96I34 528 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 RPL10LQ96L21 214 aaKnown RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 MRGPRX3Q96LB0 322 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 TRIB3Q96RU7 358 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SH3GL2Q99962 352 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 APOL2Q9BQE5 337 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 FOXQ1Q9C009 403 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 EPB41L4BQ9H329 900 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 MAGEE1Q9HCI5 957 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SLC2A4RGQ9NR83 387 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 RAD18Q9NS91 495 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SYBUQ9NX95 663 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 MOCS1Q9NZB8 636 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SENP1Q9P0U3 644 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 VPS18Q9P253 973 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 TXNDC16Q9P2K2 825 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 PSMC3IPQ9P2W1 217 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 THAP10Q9P2Z0 257 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 DKK3Q9UBP4 350 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 EVLQ9UI08 416 aaPredicted RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 SLCO3A1Q9UIG8 710 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 RALYQ9UKM9 306 aaKnown RBP6.64□□□□□ -1.35
VAMP3-202ENST00000470357 CHKBQ9Y259 395 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 NFS1Q9Y697 457 aa6.64□□□□□ -1.35
VAMP3-202ENST00000470357 IQANK1A0A1B0GTG1 560 aa6.63□□□□□ -1.35
VAMP3-202ENST00000470357 CNOT1A5YKK6 2376 aaKnown RBP6.63□□□□□ -1.35
VAMP3-202ENST00000470357 MROH6A6NGR9 719 aa6.63□□□□□ -1.35
VAMP3-202ENST00000470357 OTOL1A6NHN0 477 aaPredicted RBP6.63□□□□□ -1.35
VAMP3-202ENST00000470357 FAM159BA6NKW6 160 aa6.63□□□□□ -1.35
VAMP3-202ENST00000470357 PRRT4C9JH25 899 aa6.63□□□□□ -1.35
VAMP3-202ENST00000470357 C1QTNF3-AMACRE9PGA6 284 aa6.63□□□□□ -1.35
VAMP3-202ENST00000470357 SPECC1L-ADORA2AF8WAN1 911 aa6.63□□□□□ -1.35
VAMP3-202ENST00000470357 MAN2B1O00754 1011 aa6.63□□□□□ -1.35
VAMP3-202ENST00000470357 TRAFD1O14545 582 aaPredicted RBP6.63□□□□□ -1.35
VAMP3-202ENST00000470357 GIPC1O14908 333 aa6.63□□□□□ -1.35
VAMP3-202ENST00000470357 PFDN6O15212 129 aa6.63□□□□□ -1.35
VAMP3-202ENST00000470357 RGS16O15492 202 aaPredicted RBP6.63□□□□□ -1.35
VAMP3-202ENST00000470357 SLC7A4O43246 635 aa6.63□□□□□ -1.35
VAMP3-202ENST00000470357 RNASEH1O60930 286 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms