RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SNX20Q7Z614 316 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 CILP2Q8IUL8 1156 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 DEFB119Q8N690 84 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 TMEM145Q8NBT3 493 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 C2CD4AQ8NCU7 369 aaPredicted RBP11.18□□□□□ -0.62
SREBF1-209ENST00000470247 CADM4Q8NFZ8 388 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 OR2W6PQ8NHA6 318 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 C1orf216Q8TAB5 229 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 BTN2A2Q8WVV5 523 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 CCDC97Q96F63 343 aaPredicted RBP11.18□□□□□ -0.62
SREBF1-209ENST00000470247 DHRS4Q9BTZ2 278 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 ZSCAN5AQ9BUG6 496 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 SPATA16Q9BXB7 569 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 PCED1AQ9H1Q7 454 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 ASB8Q9H765 288 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 ARFGAP3Q9NP61 516 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 FZD3Q9NPG1 666 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 SMOXQ9NWM0 555 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 KCTD5Q9NXV2 234 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 VPS18Q9P253 973 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 FBXO5Q9UKT4 447 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 CA5BQ9Y2D0 317 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.18□□□□□ -0.62
SREBF1-209ENST00000470247 SDK1Q7Z5N4 2213 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 PLXNA2O75051 1894 aa11.18□□□□□ -0.62
SREBF1-209ENST00000470247 ZNF106Q9H2Y7 1883 aaKnown RBP11.17□□□□□ -0.62
SREBF1-209ENST00000470247 IGLV3-16A0A075B6K0 115 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 A0A1W2PPC4 97 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 POM121BA6NF01 834 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 FAM155BO75949 473 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 FSBPO95073 299 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 AHSGP02765 367 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 ITGALP20701 1170 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 OGNP20774 298 aaKnown RBP11.17□□□□□ -0.62
SREBF1-209ENST00000470247 TEAD1P28347 426 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 PHBP35232 272 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 MPP1Q00013 466 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 B4GALNT1Q00973 533 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 THOC5Q13769 683 aaKnown RBP11.17□□□□□ -0.62
SREBF1-209ENST00000470247 INPP5AQ14642 412 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 STAT4Q14765 748 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 CASP8Q14790 479 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 ANGPT1Q15389 498 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 DBN1Q16643 649 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 ZNF528Q3MIS6 628 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 KHDC1Q4VXA5 237 aaKnown RBP11.17□□□□□ -0.62
SREBF1-209ENST00000470247 FASTKD1Q53R41 847 aaKnown RBP11.17□□□□□ -0.62
SREBF1-209ENST00000470247 ZRANB3Q5FWF4 1079 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 ADAMTSL4Q6UY14 1074 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 SLC36A4Q6YBV0 504 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 MARK2Q7KZI7 788 aaKnown RBP11.17□□□□□ -0.62
SREBF1-209ENST00000470247 GALNT7Q86SF2 657 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 SERPINA9Q86WD7 417 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 NXPE1Q8N323 547 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 ZBTB44Q8NCP5 570 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 DENND6BQ8NEG7 585 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 SLC44A1Q8WWI5 657 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 GAB3Q8WWW8 586 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 SCG3Q8WXD2 468 aaKnown RBP11.17□□□□□ -0.62
SREBF1-209ENST00000470247 COX14Q96I36 57 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 VPS35Q96QK1 796 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 CYTH2Q99418 400 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 FAM126AQ9BYI3 521 aaPredicted RBP11.17□□□□□ -0.62
SREBF1-209ENST00000470247 DUSP15Q9H1R2 295 aaPredicted RBP11.17□□□□□ -0.62
SREBF1-209ENST00000470247 CATSPERZQ9NTU4 200 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 ARGLU1Q9NWB6 273 aaPredicted RBP11.17□□□□□ -0.62
SREBF1-209ENST00000470247 ZNF446Q9NWS9 450 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 HS3ST3A1Q9Y663 406 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 SLC30A1Q9Y6M5 507 aa11.17□□□□□ -0.62
SREBF1-209ENST00000470247 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 HMX2A2RU54 273 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 MAP2K7O14733 419 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 OR1I1O60431 355 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 LILRB5O75023 590 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 NDUFS2O75306 463 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 TCEA3O75764 348 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 HAUS5O94927 633 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 PCCBP05166 539 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 HNRNPA2B1P22626 353 aaKnown RBP11.16□□□□□ -0.62
SREBF1-209ENST00000470247 ACRV1P26436 265 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 SLC1A2P43004 574 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 GPR1P46091 355 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 LEPRP48357 1165 aaKnown RBP11.16□□□□□ -0.62
SREBF1-209ENST00000470247 CLDN2P57739 230 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 CDK3Q00526 305 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 RPL6Q02878 288 aaKnown RBP11.16□□□□□ -0.62
SREBF1-209ENST00000470247 ITGA9Q13797 1035 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 SETMARQ53H47 684 aaPredicted RBP11.16□□□□□ -0.62
SREBF1-209ENST00000470247 ZNF648Q5T619 568 aaPredicted RBP11.16□□□□□ -0.62
SREBF1-209ENST00000470247 GPRC6AQ5T6X5 926 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 ZNF470Q6ECI4 717 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 CNSTQ6PJW8 725 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 GCNT7Q6ZNI0 430 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 KIAA0408Q6ZU52 694 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 TAS2R42Q7RTR8 314 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 LMNTD2Q8IXW0 634 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 TMEFF1Q8IYR6 380 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 PPM1NQ8N819 430 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 CALML6Q8TD86 181 aa11.16□□□□□ -0.62
SREBF1-209ENST00000470247 DNASE2BQ8WZ79 361 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms