RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 OR6Y1Q8NGX8 325 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 CCDC97Q96F63 343 aaPredicted RBP18.02■□□□□ 0.48
SMC4-211ENST00000469858 GPR21Q99679 349 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 ALG9Q9H6U8 611 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 PCDH12Q9NPG4 1184 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 CRLS1Q9UJA2 301 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 PLXNB3Q9ULL4 1909 aa18.02■□□□□ 0.48
SMC4-211ENST00000469858 KPNA3O00505 521 aaPredicted RBP18.02■□□□□ 0.47
SMC4-211ENST00000469858 VPS26AO75436 327 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 RBP1P09455 135 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 CYP2A6P11509 494 aaPredicted RBP18.02■□□□□ 0.47
SMC4-211ENST00000469858 TIMP2P16035 220 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 XPAP23025 273 aaPredicted RBP18.02■□□□□ 0.47
SMC4-211ENST00000469858 ARRB2P32121 409 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 PPARGP37231 505 aaPredicted RBP18.02■□□□□ 0.47
SMC4-211ENST00000469858 HNRNPA1L2Q32P51 320 aaKnown RBP18.02■□□□□ 0.47
SMC4-211ENST00000469858 SETMARQ53H47 684 aaPredicted RBP18.02■□□□□ 0.47
SMC4-211ENST00000469858 PAQR3Q6TCH7 311 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 SERPINA13PQ6UXR4 307 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 ATG14Q6ZNE5 492 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 YTHDF3Q7Z739 585 aaKnown RBP18.02■□□□□ 0.47
SMC4-211ENST00000469858 TTC7BQ86TV6 843 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 ZNF398Q8TD17 642 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 PPP4R1Q8TF05 950 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 CHFRQ96EP1 664 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 SORT1Q99523 831 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 TTC1Q99614 292 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 TRMT61BQ9BVS5 477 aaKnown RBP18.02■□□□□ 0.47
SMC4-211ENST00000469858 GATA5Q9BWX5 397 aaPredicted RBP18.02■□□□□ 0.47
SMC4-211ENST00000469858 ZDHHC4Q9NPG8 344 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 ACSS2Q9NR19 701 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 GALPQ9UBC7 116 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 MTCH2Q9Y6C9 303 aa18.02■□□□□ 0.47
SMC4-211ENST00000469858 EDDM13A0A1B0GTR0 161 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 E5RI56 91 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 PRMT5O14744 637 aaPredicted RBP18.01■□□□□ 0.47
SMC4-211ENST00000469858 ZBTB14O43829 449 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 H2AFYO75367 372 aaKnown RBP18.01■□□□□ 0.47
SMC4-211ENST00000469858 ESR1P03372 595 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 PYGLP06737 847 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 CD1DP15813 335 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 ACRV1P26436 265 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 VIPR1P32241 457 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 ADARP55265 1226 aaKnown RBP18.01■□□□□ 0.47
SMC4-211ENST00000469858 UCMAQ8WVF2 138 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 MOCOSQ96EN8 888 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 BOCQ9BWV1 1114 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 TMEM120AQ9BXJ8 343 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 P2RY12Q9H244 342 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 KCNK13Q9HB14 408 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 SYTL2Q9HCH5 934 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 SARDHQ9UL12 918 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 DNAJC16Q9Y2G8 782 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 TICRRQ7Z2Z1 1910 aa18.01■□□□□ 0.47
SMC4-211ENST00000469858 TRBV5-4A0A0C4DH59 114 aa18■□□□□ 0.47
SMC4-211ENST00000469858 ANTXRLA6NF34 631 aa18■□□□□ 0.47
SMC4-211ENST00000469858 NEMP2A6NFY4 417 aa18■□□□□ 0.47
SMC4-211ENST00000469858 C16orf96A6NNT2 1141 aa18■□□□□ 0.47
SMC4-211ENST00000469858 KAT7O95251 611 aa18■□□□□ 0.47
SMC4-211ENST00000469858 ZNF7P17097 686 aaPredicted RBP18■□□□□ 0.47
SMC4-211ENST00000469858 CHRM3P20309 590 aa18■□□□□ 0.47
SMC4-211ENST00000469858 SPINT3P49223 89 aa18■□□□□ 0.47
SMC4-211ENST00000469858 ARFIP2P53365 341 aa18■□□□□ 0.47
SMC4-211ENST00000469858 PTPN5P54829 565 aa18■□□□□ 0.47
SMC4-211ENST00000469858 ITPRIPL2Q3MIP1 535 aa18■□□□□ 0.47
SMC4-211ENST00000469858 C9orf64Q5T6V5 341 aa18■□□□□ 0.47
SMC4-211ENST00000469858 PARS2Q7L3T8 475 aaKnown RBP18■□□□□ 0.47
SMC4-211ENST00000469858 ISCA2Q86U28 154 aa18■□□□□ 0.47
SMC4-211ENST00000469858 RBFAQ8N0V3 343 aa18■□□□□ 0.47
SMC4-211ENST00000469858 KDM1BQ8NB78 822 aa18■□□□□ 0.47
SMC4-211ENST00000469858 SIDT2Q8NBJ9 832 aaKnown RBP18■□□□□ 0.47
SMC4-211ENST00000469858 TXNDC5Q8NBS9 432 aaKnown RBP18■□□□□ 0.47
SMC4-211ENST00000469858 NAT14Q8WUY8 206 aa18■□□□□ 0.47
SMC4-211ENST00000469858 PTERQ96BW5 349 aa18■□□□□ 0.47
SMC4-211ENST00000469858 MSLNLQ96KJ4 702 aa18■□□□□ 0.47
SMC4-211ENST00000469858 SLC30A3Q99726 388 aa18■□□□□ 0.47
SMC4-211ENST00000469858 CLPBQ9H078 707 aa18■□□□□ 0.47
SMC4-211ENST00000469858 DKK3Q9UBP4 350 aa18■□□□□ 0.47
SMC4-211ENST00000469858 CD84Q9UIB8 345 aa18■□□□□ 0.47
SMC4-211ENST00000469858 COMMD10Q9Y6G5 202 aa18■□□□□ 0.47
SMC4-211ENST00000469858 OAS3Q9Y6K5 1087 aaKnown RBP18■□□□□ 0.47
SMC4-211ENST00000469858 IQCF5A8MTL0 148 aa18■□□□□ 0.47
SMC4-211ENST00000469858 TMEM114B3SHH9 223 aa18■□□□□ 0.47
SMC4-211ENST00000469858 ECI2O75521 394 aa18■□□□□ 0.47
SMC4-211ENST00000469858 HSPA4LO95757 839 aa18■□□□□ 0.47
SMC4-211ENST00000469858 PRNPP04156 253 aa18■□□□□ 0.47
SMC4-211ENST00000469858 ZNF30P17039 623 aa18■□□□□ 0.47
SMC4-211ENST00000469858 ATP5F1P24539 256 aaPredicted RBP18■□□□□ 0.47
SMC4-211ENST00000469858 NFKBIAP25963 317 aa18■□□□□ 0.47
SMC4-211ENST00000469858 PRKAA2P54646 552 aa18■□□□□ 0.47
SMC4-211ENST00000469858 NAGLUP54802 743 aa18■□□□□ 0.47
SMC4-211ENST00000469858 PFKPQ01813 784 aa18■□□□□ 0.47
SMC4-211ENST00000469858 SPRED3Q2MJR0 410 aa18■□□□□ 0.47
SMC4-211ENST00000469858 GPR33Q49SQ1 333 aa18■□□□□ 0.47
SMC4-211ENST00000469858 MICALL1Q8N3F8 863 aa18■□□□□ 0.47
SMC4-211ENST00000469858 FITM2Q8N6M3 262 aa18■□□□□ 0.47
SMC4-211ENST00000469858 PIWIL2Q8TC59 973 aaKnown RBP18■□□□□ 0.47
SMC4-211ENST00000469858 OR8D1Q8WZ84 308 aa18■□□□□ 0.47
SMC4-211ENST00000469858 KCNJ9Q92806 393 aa18■□□□□ 0.47
SMC4-211ENST00000469858 PLEKHG4BQ96PX9 1271 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms