RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 GPR33Q49SQ1 333 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 PPM1JQ5JR12 505 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 CERS6Q6ZMG9 384 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 CMC1Q7Z7K0 106 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 RAVER1Q8IY67 606 aaKnown RBP12.75□□□□□ -0.37
RUNX1-213ENST00000469087 PELI3Q8N2H9 469 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 GPATCH11Q8N954 259 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 OR14C36Q8NHC7 312 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 CXorf40AQ8TE69 158 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 HMGB4Q8WW32 186 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 SCG3Q8WXD2 468 aaKnown RBP12.75□□□□□ -0.37
RUNX1-213ENST00000469087 LPGAT1Q92604 370 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 DTD2Q96FN9 168 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 NECAB3Q96P71 396 aaPredicted RBP12.75□□□□□ -0.37
RUNX1-213ENST00000469087 SPATA16Q9BXB7 569 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 CDH19Q9H159 772 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 POLMQ9NP87 494 aaPredicted RBP12.75□□□□□ -0.37
RUNX1-213ENST00000469087 INTS10Q9NVR2 710 aaKnown RBP12.75□□□□□ -0.37
RUNX1-213ENST00000469087 SENP1Q9P0U3 644 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 EBF1Q9UH73 591 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 SLC39A10Q9ULF5 831 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 PLXNB3Q9ULL4 1909 aa12.75□□□□□ -0.37
RUNX1-213ENST00000469087 NUMA1Q14980 2115 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 PLRG1O43660 514 aaKnown RBP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 LZTS3O60299 673 aaPredicted RBP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 ATG13O75143 517 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 SPAG7O75391 227 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 ACADMP11310 421 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 NR1D1P20393 614 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 ACRV1P26436 265 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 TYK2P29597 1187 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 FMO4P31512 558 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 PTGER3P43115 390 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 CSRP3P50461 194 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 TPMTP51580 245 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 DGKEP52429 567 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 PPP2R2AP63151 447 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 USP10Q14694 798 aaKnown RBP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 AARS2Q5JTZ9 985 aaKnown RBP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 KIAA1324Q6UXG2 1013 aaKnown RBP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 USP30Q70CQ3 517 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 CYP2U1Q7Z449 544 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 SLC41A1Q8IVJ1 513 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 SPNS2Q8IVW8 549 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 CEP97Q8IW35 865 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 NRSN1Q8IZ57 195 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 NXPE1Q8N323 547 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 BANPQ8N9N5 519 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 DTX3LQ8TDB6 740 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 ISL2Q96A47 359 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 AP2M1Q96CW1 435 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 ELMO2Q96JJ3 720 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 BIRC8Q96P09 236 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 SMC6Q96SB8 1091 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 BOCQ9BWV1 1114 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 SNX15Q9NRS6 342 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 RAD18Q9NS91 495 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 NFKBIL1Q9UBC1 381 aaPredicted RBP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 CRLS1Q9UJA2 301 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 VWA7Q9Y334 891 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 TRPM6Q9BX84 2022 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 PLXNA2O75051 1894 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 UBA6A0AVT1 1052 aaPredicted RBP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 FADS2P1A8MWK0 482 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 TYROBPO43914 113 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 GMPRP36959 345 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 MAGEA12P43365 314 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 POLD2P49005 469 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 CLCN5P51795 746 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 ADPRHP54922 357 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 TAS2R39P59534 338 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 ZXDAP98168 799 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 TIAL1Q01085 375 aaKnown RBP eCLIP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 ITGA9Q13797 1035 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 PDE1CQ14123 709 aaPredicted RBP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 TTC31Q49AM3 519 aaPredicted RBP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 HECTD2Q5U5R9 776 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 SEL1L3Q68CR1 1132 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 FAM124AQ86V42 546 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 KBTBD6Q86V97 674 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 TRAM1L1Q8N609 369 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 PJA1Q8NG27 643 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 MDM1Q8TC05 714 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 NAT14Q8WUY8 206 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 CLDN23Q96B33 292 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 OLFM1Q99784 485 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 SLC13A1Q9BZW2 595 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 KCNK9Q9NPC2 374 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 ITM2CQ9NQX7 267 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 FZD4Q9ULV1 537 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 ZFR2Q9UPR6 939 aaKnown RBP12.74□□□□□ -0.37
RUNX1-213ENST00000469087 NCKAP1Q9Y2A7 1128 aa12.74□□□□□ -0.37
RUNX1-213ENST00000469087 TBC1D3DA0A087WVF3 549 aa12.73□□□□□ -0.37
RUNX1-213ENST00000469087 TBC1D3IA0A087WXS9 549 aa12.73□□□□□ -0.37
RUNX1-213ENST00000469087 TBC1D3EA0A087X179 549 aa12.73□□□□□ -0.37
RUNX1-213ENST00000469087 TBC1D3KA0A087X1G2 549 aa12.73□□□□□ -0.37
RUNX1-213ENST00000469087 TBC1D3FA6NER0 549 aaPredicted RBP12.73□□□□□ -0.37
RUNX1-213ENST00000469087 TBC1D3LB9A6J9 549 aa12.73□□□□□ -0.37
RUNX1-213ENST00000469087 PFDN6O15212 129 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms