RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 RRP1P56182 461 aaKnown RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 PNLIPRP3Q17RR3 467 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 ZNF805Q5CZA5 627 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 PPP6R3Q5H9R7 873 aaPredicted RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 FSCBQ5H9T9 825 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 RARS2Q5T160 578 aaKnown RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 GPR139Q6DWJ6 353 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 NAA16Q6N069 864 aaPredicted RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 PDXDC1Q6P996 788 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 TAOK1Q7L7X3 1001 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 SDCCAG8Q86SQ7 713 aaPredicted RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 LRRC59Q96AG4 307 aaKnown RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 LRFN5Q96NI6 719 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 FIZ1Q96SL8 496 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 SH3GL2Q99962 352 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 C1QTNF1Q9BXJ1 281 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 SEBOXQ9HB31 216 aaPredicted RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 CNGB3Q9NQW8 809 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 NFKBIL1Q9UBC1 381 aaPredicted RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 MAGED1Q9Y5V3 778 aaPredicted RBP5.1□□□□□ -1.59
LSM5-209ENST00000468872 PTGDR2Q9Y5Y4 395 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 FAM169AQ9Y6X4 670 aa5.1□□□□□ -1.59
LSM5-209ENST00000468872 ASAP2O43150 1006 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 GPC4O75487 556 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 HIST1H2ABP04908 130 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 MMP9P14780 707 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 HIST1H2ADP20671 130 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 UBA1P22314 1058 aaKnown RBP5.09□□□□□ -1.59
LSM5-209ENST00000468872 CDC25AP30304 524 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 PGGT1BP53609 377 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 PNLIPRP2P54317 469 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 ABATP80404 500 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 CALD1Q05682 793 aaKnown RBP5.09□□□□□ -1.59
LSM5-209ENST00000468872 RPUSD3Q6P087 351 aaKnown RBP5.09□□□□□ -1.59
LSM5-209ENST00000468872 HIST3H2AQ7L7L0 130 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 CACNA2D4Q7Z3S7 1137 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 ADGRA1Q86SQ6 560 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 ZC3HC1Q86WB0 502 aaKnown RBP5.09□□□□□ -1.59
LSM5-209ENST00000468872 DNAAF5Q86Y56 855 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 SCYL3Q8IZE3 742 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 DSELQ8IZU8 1212 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 CCDC191Q8NCU4 936 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 RND1Q92730 232 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 GRAMD2BQ96HH9 432 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 GCNAQ96QF7 691 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 ZPBPQ9BS86 351 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 SPRY4Q9C004 299 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 RBM38Q9H0Z9 239 aaKnown RBP5.09□□□□□ -1.59
LSM5-209ENST00000468872 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.09□□□□□ -1.59
LSM5-209ENST00000468872 OR14J1Q9UGF5 321 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 TINAGQ9UJW2 476 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 TTC7AQ9ULT0 858 aaPredicted RBP5.09□□□□□ -1.59
LSM5-209ENST00000468872 FZD10Q9ULW2 581 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 PLAGL1Q9UM63 463 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 EXO1Q9UQ84 846 aaKnown RBP5.09□□□□□ -1.59
LSM5-209ENST00000468872 PAM16Q9Y3D7 125 aa5.09□□□□□ -1.59
LSM5-209ENST00000468872 LRRC72A6NJI9 287 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 LACTBL1A8MY62 500 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 M0QZ24 198 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 NDUFS7O75251 213 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 CSPG5O95196 566 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 TRIM21P19474 475 aaKnown RBP5.08□□□□□ -1.6
LSM5-209ENST00000468872 STAT2P52630 851 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 ECT2LQ008S8 904 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 ROR2Q01974 943 aaKnown RBP5.08□□□□□ -1.6
LSM5-209ENST00000468872 SPOCK1Q08629 439 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 SREBF2Q12772 1141 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 GRIK2Q13002 908 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 KCNC3Q14003 757 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 RASA2Q15283 850 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 DLG2Q15700 870 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 TYW3Q6IPR3 259 aaKnown RBP5.08□□□□□ -1.6
LSM5-209ENST00000468872 ZNF280DQ6N043 979 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 KCTD6Q8NC69 237 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 SMRP1Q8NCR6 262 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 OIT3Q8WWZ8 545 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 APBB2Q92870 758 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 RHBDF1Q96CC6 855 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 TXNDC15Q96J42 360 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 KLHL4Q9C0H6 718 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 EPB41L5Q9HCM4 733 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 ARHGEF38Q9NXL2 777 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 ACSL5Q9ULC5 683 aa5.08□□□□□ -1.6
LSM5-209ENST00000468872 KCNK5O95279 499 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 EGFP01133 1207 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 ARRB2P32121 409 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 STX2P32856 288 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 MSH2P43246 934 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 AMTP48728 403 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 GRSF1Q12849 480 aaKnown RBP eCLIP5.07□□□□□ -1.6
LSM5-209ENST00000468872 CDC16Q13042 620 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 TNFAIP1Q13829 316 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 TMEM266Q2M3C6 531 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 ZNF585BQ52M93 769 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 PAPPA-AS1Q5QFB9 102 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 FAM69BQ5VUD6 431 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 KRT79Q5XKE5 535 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 SLC36A4Q6YBV0 504 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 DENND5BQ6ZUT9 1274 aa5.07□□□□□ -1.6
LSM5-209ENST00000468872 ARID3BQ8IVW6 561 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms