RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 PRAMEP78395 509 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 SEPT6Q14141 434 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 RASA2Q15283 850 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 IRF4Q15306 451 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 FAM153CQ494X1 144 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 MAP9Q49MG5 647 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 LDLRAP1Q5SW96 308 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 RFLNAQ6ZTI6 216 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 C3orf62Q6ZUJ4 267 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 SLC26A11Q86WA9 606 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 NXPE1Q8N323 547 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 SCAMP4Q969E2 229 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 GLYATL1Q969I3 302 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 PKNOX2Q96KN3 472 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 HINFPQ9BQA5 517 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 FAM167BQ9BTA0 163 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 RIOK2Q9BVS4 552 aaKnown RBP11.19□□□□□ -0.62
MSH5-214ENST00000468602 EPB41L4BQ9H329 900 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 CDC42EP4Q9H3Q1 356 aaKnown RBP11.19□□□□□ -0.62
MSH5-214ENST00000468602 RMI1Q9H9A7 625 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 PPCSQ9HAB8 311 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 MBNL1Q9NR56 388 aaKnown RBP11.19□□□□□ -0.62
MSH5-214ENST00000468602 NSMCE4AQ9NXX6 385 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 NINJ2Q9NZG7 142 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 FKBPLQ9UIM3 349 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 CHMP2BQ9UQN3 213 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 VPS9D1Q9Y2B5 631 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 SLC17A4Q9Y2C5 497 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 MAD1L1Q9Y6D9 718 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 EPG5Q9HCE0 2579 aa11.19□□□□□ -0.62
MSH5-214ENST00000468602 PI4KAP42356 2102 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 TCRBV9S1A1TA0A576 114 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 A6NNZ2 444 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 FADS2P1A8MWK0 482 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 A8MX80 341 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 PROB1E7EW31 1015 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 CHUKO15111 745 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 VILLO15195 856 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 VEGFDO43915 354 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 BANF1O75531 89 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 EPN2O95208 641 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 VAPBO95292 243 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 GOT2P00505 430 aaKnown RBP11.18□□□□□ -0.62
MSH5-214ENST00000468602 GSTM1P09488 218 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 NUDT17P0C025 328 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 MYCLP1P12525 358 aaPredicted RBP11.18□□□□□ -0.62
MSH5-214ENST00000468602 KELP23276 732 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 ACRV1P26436 265 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 MC4RP32245 332 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 STX2P32856 288 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 PHBP35232 272 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 PTGER3P43115 390 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 TTPAP49638 278 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 SEMG2Q02383 582 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 GSTM4Q03013 218 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 MGAT5Q09328 741 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 PTPRCAPQ14761 206 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 STAT4Q14765 748 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 CHRNA6Q15825 494 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 ATP13A5Q4VNC0 1218 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 TEDDM1Q5T9Z0 273 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 RNF187Q5TA31 235 aaPredicted RBP11.18□□□□□ -0.62
MSH5-214ENST00000468602 LYSMD4Q5XG99 296 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 MRNIPQ6NTE8 343 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 NEPROQ6NW34 567 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 CASC4Q6P4E1 433 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 KCNMB4Q86W47 210 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 LRRC6Q86X45 466 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 CILP2Q8IUL8 1156 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 SYT12Q8IV01 421 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 PALM2Q8IXS6 379 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 PIANPQ8IYJ0 282 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 PELI3Q8N2H9 469 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 C2CD4AQ8NCU7 369 aaPredicted RBP11.18□□□□□ -0.62
MSH5-214ENST00000468602 PRSS33Q8NF86 280 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 CEP76Q8TAP6 659 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.18□□□□□ -0.62
MSH5-214ENST00000468602 ZNF669Q96BR6 464 aaPredicted RBP11.18□□□□□ -0.62
MSH5-214ENST00000468602 HIC2Q96JB3 615 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 ZNF514Q96K75 400 aaPredicted RBP11.18□□□□□ -0.62
MSH5-214ENST00000468602 LINC00615Q96LM1 132 aaPredicted RBP11.18□□□□□ -0.62
MSH5-214ENST00000468602 HSPA12BQ96MM6 686 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 TTC1Q99614 292 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 APOOQ9BUR5 198 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 ACSS3Q9H6R3 686 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 ERVMER34-1Q9H9K5 563 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 TRIM39Q9HCM9 518 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 BPIFA1Q9NP55 256 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 INTS10Q9NVR2 710 aaKnown RBP11.18□□□□□ -0.62
MSH5-214ENST00000468602 CORO1CQ9ULV4 474 aaPredicted RBP11.18□□□□□ -0.62
MSH5-214ENST00000468602 GPR34Q9UPC5 381 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 COQ6Q9Y2Z9 468 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 DNMT3AQ9Y6K1 912 aaPredicted RBP11.18□□□□□ -0.62
MSH5-214ENST00000468602 SLC30A1Q9Y6M5 507 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 DGKBQ9Y6T7 804 aa11.18□□□□□ -0.62
MSH5-214ENST00000468602 KNL1Q8NG31 2342 aa11.17□□□□□ -0.62
MSH5-214ENST00000468602 SPTY2D1-AS1A0A0U1RR47 76 aa11.17□□□□□ -0.62
MSH5-214ENST00000468602 A0A1B0GTW7 788 aa11.17□□□□□ -0.62
MSH5-214ENST00000468602 PRR19A6NJB7 356 aa11.17□□□□□ -0.62
MSH5-214ENST00000468602 K7ESM1 405 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms