RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 FTLP02792 175 aaPredicted RBP12.96□□□□□ -0.33
PTPN7-207ENST00000468385 TCN2P20062 427 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 F8A1P23610 371 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 ARL4AP40617 200 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 STAT5AP42229 794 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 EPHA4P54764 986 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 MC1RQ01726 317 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 MAP7Q14244 749 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 C16orf46Q6P387 395 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 RBM43Q6ZSC3 357 aaKnown RBP12.96□□□□□ -0.33
PTPN7-207ENST00000468385 CHST15Q7LFX5 561 aaPredicted RBP12.96□□□□□ -0.33
PTPN7-207ENST00000468385 KDELC2Q7Z4H8 507 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 NDUFAF2Q8N183 169 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 NSMCE1Q8WV22 266 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 HSPH1Q92598 858 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 SH3KBP1Q96B97 665 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 PSMG3-AS1Q96PY0 264 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 WDR24Q96S15 920 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 RIOK2Q9BVS4 552 aaKnown RBP12.96□□□□□ -0.33
PTPN7-207ENST00000468385 TBC1D10AQ9BXI6 508 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 HSD3B7Q9H2F3 369 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 SIDT1Q9NXL6 827 aaKnown RBP12.96□□□□□ -0.33
PTPN7-207ENST00000468385 CHMP5Q9NZZ3 219 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 VPS18Q9P253 973 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 KLHL3Q9UH77 587 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 ZNHIT2Q9UHR6 403 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 MYO6Q9UM54 1294 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 KCNK6Q9Y257 313 aa12.96□□□□□ -0.33
PTPN7-207ENST00000468385 K7EM74 188 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 POLR1CO15160 346 aaPredicted RBP12.95□□□□□ -0.34
PTPN7-207ENST00000468385 CLDN7O95471 211 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 ATP1A1P05023 1023 aaKnown RBP12.95□□□□□ -0.34
PTPN7-207ENST00000468385 RARAP10276 462 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 GZMAP12544 262 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 SERPINB6P35237 376 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 MAPK9P45984 424 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 CD97P48960 835 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 MYL5Q02045 173 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 KLRB1Q12918 225 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 BOLA3Q53S33 107 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 TXNRD3NBQ6F5E7 133 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 ZNF571Q7Z3V5 609 aaPredicted RBP12.95□□□□□ -0.34
PTPN7-207ENST00000468385 SLC9B2Q86UD5 537 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 RAVER1Q8IY67 606 aaKnown RBP12.95□□□□□ -0.34
PTPN7-207ENST00000468385 ESX1Q8N693 406 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 ZNF653Q96CK0 615 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 HERPUD2Q9BSE4 406 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 POLR1EQ9GZS1 481 aaKnown RBP12.95□□□□□ -0.34
PTPN7-207ENST00000468385 STN1Q9H668 368 aaKnown RBP12.95□□□□□ -0.34
PTPN7-207ENST00000468385 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.95□□□□□ -0.34
PTPN7-207ENST00000468385 TP53TG5Q9Y2B4 290 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 KCNMB2Q9Y691 235 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 RPS6KL1Q9Y6S9 549 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 SCINQ9Y6U3 715 aa12.95□□□□□ -0.34
PTPN7-207ENST00000468385 MN1Q10571 1320 aaPredicted RBP12.94□□□□□ -0.34
PTPN7-207ENST00000468385 LRRC53A6NM62 1247 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 DDX3XO00571 662 aaKnown RBP eCLIP12.94□□□□□ -0.341e-6■□□□□ 8.9
PTPN7-207ENST00000468385 MTSS1O43312 755 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 PRLP01236 227 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 ANKRD34CP0C6C1 535 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 ACP5P13686 325 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 F3P13726 295 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 ZNF28P17035 718 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 NR1D1P20393 614 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 GFERP55789 205 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 ITKQ08881 620 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 SEPT6Q14141 434 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 E4F1Q66K89 784 aaPredicted RBP12.94□□□□□ -0.34
PTPN7-207ENST00000468385 ALG1LQ6GMV1 187 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 LYSMD3Q7Z3D4 306 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 RNF31Q96EP0 1072 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 TDRD1Q9BXT4 1180 aaKnown RBP12.94□□□□□ -0.34
PTPN7-207ENST00000468385 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.94□□□□□ -0.34
PTPN7-207ENST00000468385 EPB41L1Q9H4G0 881 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 PCDH18Q9HCL0 1135 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 OGFRQ9NZT2 677 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 MYO1AQ9UBC5 1043 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 CHKBQ9Y259 395 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 KCTD3Q9Y597 815 aa12.94□□□□□ -0.34
PTPN7-207ENST00000468385 NBASA2RRP1 2371 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 KIR2DS5A0A0G2JLQ3 304 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 A0A0G2JNG1 304 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 BLACEA4D250 179 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 LILRA5A6NI73 299 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 FADS2P1A8MWK0 482 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 KIR2DS3K7RE56 304 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 SNX2O60749 519 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 C9P02748 559 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 FURINP09958 794 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 SLC2A4P14672 509 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 CDK11BP21127 795 aaKnown RBP12.93□□□□□ -0.34
PTPN7-207ENST00000468385 IL4RP24394 825 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 DLSTP36957 453 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 EPHB1P54762 984 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 UBE2IP63279 158 aaKnown RBP12.93□□□□□ -0.34
PTPN7-207ENST00000468385 DSC2Q02487 901 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 KIR2DS5Q14953 304 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 ASIC2Q16515 512 aa12.93□□□□□ -0.34
PTPN7-207ENST00000468385 HENMT1Q5T8I9 393 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms